Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CDKL5O76039 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.01■■□□□ 1.11
CDKL5O76039 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.01■■□□□ 1.11
CDKL5O76039 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.01■■□□□ 1.11
CDKL5O76039 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
CDKL5O76039 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 AL355355.2-201ENST00000442321 338 ntBASIC22.01■■□□□ 1.11
CDKL5O76039 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 AP006294.2-201ENST00000641667 209 ntBASIC22.01■■□□□ 1.11
CDKL5O76039 AL031598.1-201ENST00000561511 1773 ntBASIC22.01■■□□□ 1.11
CDKL5O76039 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.01■■□□□ 1.11
CDKL5O76039 AL138781.2-201ENST00000617896 1843 ntBASIC22.01■■□□□ 1.11
CDKL5O76039 AL020996.1-203ENST00000536896 2307 ntBASIC22.01■■□□□ 1.11
CDKL5O76039 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKL5O76039 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22■■□□□ 1.11
CDKL5O76039 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22■■□□□ 1.11
CDKL5O76039 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDKL5O76039 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDKL5O76039 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDKL5O76039 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 AC096733.2-201ENST00000609937 1394 ntBASIC21.99■■□□□ 1.11
CDKL5O76039 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDKL5O76039 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CDKL5O76039 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.99■■□□□ 1.11
CDKL5O76039 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDKL5O76039 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.99■■□□□ 1.11
CDKL5O76039 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.99■■□□□ 1.11
CDKL5O76039 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 AC026471.5-201ENST00000615068 467 ntBASIC21.99■■□□□ 1.11
CDKL5O76039 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 AL512353.2-201ENST00000448759 1962 ntBASIC21.99■■□□□ 1.11
CDKL5O76039 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CDKL5O76039 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.99■■□□□ 1.11
CDKL5O76039 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDKL5O76039 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDKL5O76039 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CDKL5O76039 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.98■■□□□ 1.11
CDKL5O76039 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.98■■□□□ 1.11
CDKL5O76039 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.98■■□□□ 1.11
CDKL5O76039 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
CDKL5O76039 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.98■■□□□ 1.11
CDKL5O76039 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKL5O76039 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CDKL5O76039 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
CDKL5O76039 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms