Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.56■□□□□ 0.56
VPS4BO75351 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.56■□□□□ 0.56
VPS4BO75351 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS4BO75351 AC006557.6-201ENST00000623071 864 ntBASIC18.56■□□□□ 0.56
VPS4BO75351 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VPS4BO75351 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VPS4BO75351 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS4BO75351 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VPS4BO75351 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS4BO75351 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS4BO75351 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.56■□□□□ 0.56
VPS4BO75351 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
VPS4BO75351 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS4BO75351 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VPS4BO75351 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS4BO75351 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 FEM1AP3-201ENST00000403722 1741 ntBASIC18.55■□□□□ 0.56
VPS4BO75351 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS4BO75351 AC090164.3-201ENST00000610780 2143 ntBASIC18.55■□□□□ 0.56
VPS4BO75351 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.55■□□□□ 0.56
VPS4BO75351 PRKY-204ENST00000533551 1019 ntBASIC18.55■□□□□ 0.56
VPS4BO75351 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS4BO75351 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS4BO75351 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS4BO75351 AC113410.3-201ENST00000623366 203 ntBASIC18.55■□□□□ 0.56
VPS4BO75351 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS4BO75351 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS4BO75351 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS4BO75351 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VPS4BO75351 AC020763.4-201ENST00000623414 4170 ntBASIC18.55■□□□□ 0.56
VPS4BO75351 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS4BO75351 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS4BO75351 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VPS4BO75351 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS4BO75351 KRT18P35-201ENST00000510488 1269 ntBASIC18.54■□□□□ 0.56
VPS4BO75351 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.54■□□□□ 0.56
VPS4BO75351 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.54■□□□□ 0.56
VPS4BO75351 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.54■□□□□ 0.56
VPS4BO75351 AC012306.2-201ENST00000609350 630 ntBASIC18.54■□□□□ 0.56
VPS4BO75351 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS4BO75351 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS4BO75351 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS4BO75351 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS4BO75351 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 AC124283.5-201ENST00000624661 1809 ntBASIC18.53■□□□□ 0.56
VPS4BO75351 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VPS4BO75351 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 WIZP1-201ENST00000531444 2299 ntBASIC18.53■□□□□ 0.56
VPS4BO75351 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS4BO75351 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS4BO75351 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 KRASP1-201ENST00000407852 552 ntBASIC18.53■□□□□ 0.56
VPS4BO75351 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS4BO75351 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS4BO75351 TSPY15P-201ENST00000457163 923 ntBASIC18.53■□□□□ 0.56
VPS4BO75351 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS4BO75351 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS4BO75351 AL355075.4-201ENST00000554988 638 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms