Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.16■□□□□ 0.5
CPNE3O75131 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CPNE3O75131 AC087388.1-201ENST00000571370 1112 ntBASIC18.16■□□□□ 0.5
CPNE3O75131 AL138966.2-201ENST00000621997 464 ntBASIC18.16■□□□□ 0.5
CPNE3O75131 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPNE3O75131 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE3O75131 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CPNE3O75131 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPNE3O75131 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE3O75131 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE3O75131 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CPNE3O75131 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE3O75131 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE3O75131 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE3O75131 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 WWOX-216ENST00000569818 525 ntBASIC18.15■□□□□ 0.5
CPNE3O75131 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE3O75131 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CPNE3O75131 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE3O75131 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 KRT8P11-201ENST00000409686 1436 ntBASIC18.15■□□□□ 0.5
CPNE3O75131 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE3O75131 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE3O75131 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE3O75131 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CPNE3O75131 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CPNE3O75131 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
CPNE3O75131 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.14■□□□□ 0.49
CPNE3O75131 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 AC117947.1-201ENST00000427448 529 ntBASIC18.14■□□□□ 0.49
CPNE3O75131 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.14■□□□□ 0.49
CPNE3O75131 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CPNE3O75131 AC022616.7-201ENST00000525383 220 ntBASIC18.14■□□□□ 0.49
CPNE3O75131 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CPNE3O75131 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CPNE3O75131 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPNE3O75131 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPNE3O75131 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CPNE3O75131 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.13■□□□□ 0.49
CPNE3O75131 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 COX11P1-201ENST00000489116 835 ntBASIC18.13■□□□□ 0.49
CPNE3O75131 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CPNE3O75131 AC139887.4-201ENST00000607877 719 ntBASIC18.13■□□□□ 0.49
CPNE3O75131 AC141257.4-201ENST00000634557 245 ntBASIC18.13■□□□□ 0.49
CPNE3O75131 AC136944.6-201ENST00000634818 245 ntBASIC18.13■□□□□ 0.49
CPNE3O75131 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 AC098818.2-201ENST00000564925 2320 ntBASIC18.13■□□□□ 0.49
CPNE3O75131 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms