Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 AC090340.1-201ENST00000620778 4980 ntBASIC18.79■□□□□ 0.6
KLHL41O60662 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.79■□□□□ 0.6
KLHL41O60662 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KLHL41O60662 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL41O60662 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
KLHL41O60662 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 AC239809.2-201ENST00000415381 517 ntBASIC18.78■□□□□ 0.6
KLHL41O60662 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.78■□□□□ 0.6
KLHL41O60662 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.78■□□□□ 0.6
KLHL41O60662 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.78■□□□□ 0.6
KLHL41O60662 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.78■□□□□ 0.6
KLHL41O60662 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.78■□□□□ 0.6
KLHL41O60662 AC073912.3-201ENST00000624414 853 ntBASIC18.78■□□□□ 0.6
KLHL41O60662 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL41O60662 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.78■□□□□ 0.6
KLHL41O60662 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
KLHL41O60662 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL41O60662 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KLHL41O60662 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KLHL41O60662 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.77■□□□□ 0.6
KLHL41O60662 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
KLHL41O60662 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.77■□□□□ 0.6
KLHL41O60662 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.77■□□□□ 0.6
KLHL41O60662 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.77■□□□□ 0.6
KLHL41O60662 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.77■□□□□ 0.6
KLHL41O60662 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.77■□□□□ 0.6
KLHL41O60662 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.77■□□□□ 0.6
KLHL41O60662 AC110285.5-201ENST00000611501 352 ntBASIC18.77■□□□□ 0.6
KLHL41O60662 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KLHL41O60662 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
KLHL41O60662 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL41O60662 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KLHL41O60662 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
KLHL41O60662 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.59
KLHL41O60662 AC079598.2-202ENST00000546624 1451 ntBASIC18.77■□□□□ 0.59
KLHL41O60662 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
KLHL41O60662 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.76■□□□□ 0.59
KLHL41O60662 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.76■□□□□ 0.59
KLHL41O60662 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.76■□□□□ 0.59
KLHL41O60662 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
KLHL41O60662 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KLHL41O60662 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KLHL41O60662 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.76■□□□□ 0.59
KLHL41O60662 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.76■□□□□ 0.59
KLHL41O60662 MTDHP1-201ENST00000605323 784 ntBASIC18.76■□□□□ 0.59
KLHL41O60662 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms