Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCNT1O60563 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.51■■□□□ 1.03
CCNT1O60563 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 AC006333.2-201ENST00000607957 2099 ntBASIC21.51■■□□□ 1.03
CCNT1O60563 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNT1O60563 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CCNT1O60563 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNT1O60563 KRT8P3-201ENST00000519669 1449 ntBASIC21.5■■□□□ 1.03
CCNT1O60563 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.5■■□□□ 1.03
CCNT1O60563 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.5■■□□□ 1.03
CCNT1O60563 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.5■■□□□ 1.03
CCNT1O60563 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNT1O60563 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNT1O60563 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNT1O60563 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNT1O60563 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCNT1O60563 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNT1O60563 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNT1O60563 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 CA15P1-201ENST00000481698 905 ntBASIC21.49■■□□□ 1.03
CCNT1O60563 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNT1O60563 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNT1O60563 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNT1O60563 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCNT1O60563 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNT1O60563 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 BX323043.1-201ENST00000641006 1765 ntBASIC21.48■■□□□ 1.03
CCNT1O60563 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.48■■□□□ 1.03
CCNT1O60563 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CCNT1O60563 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNT1O60563 NAPSB-206ENST00000562112 1266 ntBASIC21.48■■□□□ 1.03
CCNT1O60563 C2orf69P3-201ENST00000565542 1120 ntBASIC21.48■■□□□ 1.03
CCNT1O60563 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.48■■□□□ 1.03
CCNT1O60563 AC010947.1-201ENST00000623454 693 ntBASIC21.48■■□□□ 1.03
CCNT1O60563 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
CCNT1O60563 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCNT1O60563 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNT1O60563 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNT1O60563 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCNT1O60563 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCNT1O60563 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 AC087499.1-201ENST00000418141 1075 ntBASIC21.47■■□□□ 1.03
CCNT1O60563 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNT1O60563 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNT1O60563 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNT1O60563 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNT1O60563 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCNT1O60563 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCNT1O60563 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNT1O60563 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCNT1O60563 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNT1O60563 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCNT1O60563 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCNT1O60563 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCNT1O60563 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNT1O60563 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNT1O60563 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
CCNT1O60563 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNT1O60563 SLC25A1P2-201ENST00000430693 912 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms