Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.11■□□□□ 0.49
LCMT2O60294 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LCMT2O60294 AC008622.2-201ENST00000617006 1229 ntBASIC18.11■□□□□ 0.49
LCMT2O60294 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.11■□□□□ 0.49
LCMT2O60294 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 KRT8P3-201ENST00000519669 1449 ntBASIC18.11■□□□□ 0.49
LCMT2O60294 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.11■□□□□ 0.49
LCMT2O60294 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LCMT2O60294 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.1■□□□□ 0.49
LCMT2O60294 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LCMT2O60294 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.1■□□□□ 0.49
LCMT2O60294 INGX-201ENST00000359239 846 ntBASIC18.1■□□□□ 0.49
LCMT2O60294 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.1■□□□□ 0.49
LCMT2O60294 AC087499.1-201ENST00000418141 1075 ntBASIC18.1■□□□□ 0.49
LCMT2O60294 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.1■□□□□ 0.49
LCMT2O60294 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 CA15P1-201ENST00000481698 905 ntBASIC18.1■□□□□ 0.49
LCMT2O60294 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.1■□□□□ 0.49
LCMT2O60294 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.1■□□□□ 0.49
LCMT2O60294 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 AL023803.3-201ENST00000615559 522 ntBASIC18.1■□□□□ 0.49
LCMT2O60294 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LCMT2O60294 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LCMT2O60294 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.09■□□□□ 0.49
LCMT2O60294 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.09■□□□□ 0.49
LCMT2O60294 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.09■□□□□ 0.49
LCMT2O60294 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.09■□□□□ 0.49
LCMT2O60294 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.09■□□□□ 0.49
LCMT2O60294 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.09■□□□□ 0.49
LCMT2O60294 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LCMT2O60294 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
LCMT2O60294 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LCMT2O60294 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCMT2O60294 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
LCMT2O60294 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCMT2O60294 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.08■□□□□ 0.49
LCMT2O60294 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LCMT2O60294 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCMT2O60294 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.08■□□□□ 0.48
LCMT2O60294 AC120498.9-201ENST00000339021 3867 ntBASIC18.08■□□□□ 0.48
LCMT2O60294 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.08■□□□□ 0.48
LCMT2O60294 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.08■□□□□ 0.48
LCMT2O60294 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LCMT2O60294 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LCMT2O60294 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.08■□□□□ 0.48
LCMT2O60294 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.08■□□□□ 0.48
LCMT2O60294 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
LCMT2O60294 AL512353.2-201ENST00000448759 1962 ntBASIC18.08■□□□□ 0.48
LCMT2O60294 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCMT2O60294 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.07■□□□□ 0.48
LCMT2O60294 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCMT2O60294 TSPY14P-201ENST00000303979 915 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms