Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP2O43734 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 AC083906.6-201ENST00000641366 219 ntBASIC16.87■□□□□ 0.29
TRAF3IP2O43734 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAF3IP2O43734 KRT8P3-201ENST00000519669 1449 ntBASIC16.87■□□□□ 0.29
TRAF3IP2O43734 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 MFAP1P1-201ENST00000442257 1255 ntBASIC16.86■□□□□ 0.29
TRAF3IP2O43734 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 SLC25A1P4-201ENST00000567977 778 ntBASIC16.86■□□□□ 0.29
TRAF3IP2O43734 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 AC004408.2-201ENST00000623613 2777 ntBASIC16.86■□□□□ 0.29
TRAF3IP2O43734 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.86■□□□□ 0.29
TRAF3IP2O43734 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAF3IP2O43734 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AC120498.9-201ENST00000339021 3867 ntBASIC16.85■□□□□ 0.29
TRAF3IP2O43734 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 RBM17P1-201ENST00000453646 1190 ntBASIC16.85■□□□□ 0.29
TRAF3IP2O43734 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AC097488.1-201ENST00000507834 756 ntBASIC16.85■□□□□ 0.29
TRAF3IP2O43734 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AC093525.10-201ENST00000625130 1569 ntBASIC16.85■□□□□ 0.29
TRAF3IP2O43734 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAF3IP2O43734 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAF3IP2O43734 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms