Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CALY-203ENST00000368558 825 ntTSL 5 BASIC30.67■■■□□ 2.5
CHD1O14646 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.67■■■□□ 2.5
CHD1O14646 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC30.67■■■□□ 2.5
CHD1O14646 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC30.67■■■□□ 2.5
CHD1O14646 AC040169.1-201ENST00000565382 521 ntBASIC30.67■■■□□ 2.5
CHD1O14646 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CHD1O14646 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC30.67■■■□□ 2.5
CHD1O14646 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CHD1O14646 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHD1O14646 GOLGA2P11-201ENST00000562660 1621 ntBASIC30.67■■■□□ 2.5
CHD1O14646 ENSA-205ENST00000361532 792 ntTSL 2 BASIC30.67■■■□□ 2.5
CHD1O14646 AC004832.2-201ENST00000426397 482 ntBASIC30.67■■■□□ 2.5
CHD1O14646 CYMP-203ENST00000474680 1263 ntBASIC30.67■■■□□ 2.5
CHD1O14646 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CHD1O14646 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC30.67■■■□□ 2.5
CHD1O14646 Z83851.2-201ENST00000609564 659 ntBASIC30.67■■■□□ 2.5
CHD1O14646 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
CHD1O14646 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC30.66■■■□□ 2.5
CHD1O14646 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 AL035633.1-201ENST00000406139 838 ntBASIC30.66■■■□□ 2.5
CHD1O14646 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC30.66■■■□□ 2.5
CHD1O14646 RFPL4AP1-201ENST00000530883 850 ntBASIC30.66■■■□□ 2.5
CHD1O14646 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC30.66■■■□□ 2.5
CHD1O14646 RPS15-207ENST00000591032 550 ntTSL 3 BASIC30.66■■■□□ 2.5
CHD1O14646 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHD1O14646 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 LBH-203ENST00000404397 543 ntTSL 4 BASIC30.65■■■□□ 2.5
CHD1O14646 DNAJB3-201ENST00000446806 729 ntBASIC30.65■■■□□ 2.5
CHD1O14646 AL591684.3-201ENST00000605187 298 ntBASIC30.65■■■□□ 2.5
CHD1O14646 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
CHD1O14646 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHD1O14646 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 WWC2-AS2-201ENST00000578387 2183 ntBASIC30.65■■■□□ 2.5
CHD1O14646 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC30.65■■■□□ 2.5
CHD1O14646 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CHD1O14646 MYB-221ENST00000527615 2381 ntTSL 5 BASIC30.64■■■□□ 2.5
CHD1O14646 POM121L3P-201ENST00000419331 1163 ntBASIC30.64■■■□□ 2.5
CHD1O14646 AP006288.1-201ENST00000446065 395 ntBASIC30.64■■■□□ 2.5
CHD1O14646 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC30.64■■■□□ 2.5
CHD1O14646 AC012640.2-201ENST00000561606 901 ntBASIC30.64■■■□□ 2.5
CHD1O14646 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD1O14646 AF106564.1-201ENST00000607058 2553 ntBASIC30.64■■■□□ 2.5
CHD1O14646 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC30.64■■■□□ 2.5
CHD1O14646 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHD1O14646 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.64■■■□□ 2.5
CHD1O14646 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CHD1O14646 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD1O14646 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC30.64■■■□□ 2.5
CHD1O14646 ELP6-205ENST00000439305 880 ntTSL 2 BASIC30.64■■■□□ 2.5
CHD1O14646 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD1O14646 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHD1O14646 AP001269.4-201ENST00000609611 512 ntBASIC30.64■■■□□ 2.5
CHD1O14646 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC30.64■■■□□ 2.49
CHD1O14646 FBXW4P1-201ENST00000426721 2239 ntBASIC30.64■■■□□ 2.49
CHD1O14646 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1O14646 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CHD1O14646 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
CHD1O14646 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1O14646 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1O14646 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1O14646 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC30.63■■■□□ 2.49
CHD1O14646 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1O14646 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CHD1O14646 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC30.62■■■□□ 2.49
CHD1O14646 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.62■■■□□ 2.49
CHD1O14646 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CHD1O14646 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC30.62■■■□□ 2.49
CHD1O14646 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC30.62■■■□□ 2.49
CHD1O14646 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC30.62■■■□□ 2.49
CHD1O14646 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHD1O14646 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHD1O14646 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
CHD1O14646 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1O14646 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.61■■■□□ 2.49
CHD1O14646 IMP4-203ENST00000409935 958 ntTSL 5 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms