Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRIM38O00635 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM38O00635 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 AC128688.1-201ENST00000487626 519 ntBASIC19.04■□□□□ 0.64
TRIM38O00635 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM38O00635 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.04■□□□□ 0.64
TRIM38O00635 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 AC120498.9-201ENST00000339021 3867 ntBASIC19.04■□□□□ 0.64
TRIM38O00635 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRIM38O00635 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM38O00635 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM38O00635 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM38O00635 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM38O00635 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM38O00635 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM38O00635 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRIM38O00635 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM38O00635 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM38O00635 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM38O00635 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM38O00635 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM38O00635 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM38O00635 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM38O00635 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM38O00635 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRIM38O00635 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM38O00635 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM38O00635 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM38O00635 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM38O00635 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.02■□□□□ 0.63
TRIM38O00635 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM38O00635 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRIM38O00635 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM38O00635 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM38O00635 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 AC004951.3-201ENST00000418645 1148 ntBASIC19.01■□□□□ 0.63
TRIM38O00635 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM38O00635 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM38O00635 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.01■□□□□ 0.63
TRIM38O00635 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM38O00635 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM38O00635 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM38O00635 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms