Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN3O00409 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 AC107956.1-201ENST00000494359 873 ntBASIC20.28■□□□□ 0.84
FOXN3O00409 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXN3O00409 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
FOXN3O00409 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN3O00409 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
FOXN3O00409 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN3O00409 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 CKBP1-201ENST00000565489 1086 ntBASIC20.27■□□□□ 0.84
FOXN3O00409 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXN3O00409 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.27■□□□□ 0.84
FOXN3O00409 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN3O00409 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN3O00409 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.83
FOXN3O00409 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN3O00409 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN3O00409 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN3O00409 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN3O00409 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN3O00409 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.27■□□□□ 0.83
FOXN3O00409 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXN3O00409 AC009113.1-201ENST00000570267 2443 ntBASIC20.26■□□□□ 0.83
FOXN3O00409 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
FOXN3O00409 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FOXN3O00409 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FOXN3O00409 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
FOXN3O00409 FAM207BP-201ENST00000447172 505 ntBASIC20.26■□□□□ 0.83
FOXN3O00409 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXN3O00409 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.26■□□□□ 0.83
FOXN3O00409 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXN3O00409 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 ANO7L1-203ENST00000602586 1720 ntBASIC20.26■□□□□ 0.83
FOXN3O00409 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
FOXN3O00409 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN3O00409 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.25■□□□□ 0.83
FOXN3O00409 FSCN1P1-201ENST00000568912 1481 ntBASIC20.25■□□□□ 0.83
FOXN3O00409 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.25■□□□□ 0.83
FOXN3O00409 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
FOXN3O00409 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
FOXN3O00409 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.25■□□□□ 0.83
FOXN3O00409 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXN3O00409 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 KRT8P3-201ENST00000519669 1449 ntBASIC20.25■□□□□ 0.83
FOXN3O00409 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms