Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 KRT8P32-201ENST00000512863 1461 ntBASIC18.53■□□□□ 0.56
EIF3FO00303 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 CA15P1-201ENST00000481698 905 ntBASIC18.53■□□□□ 0.56
EIF3FO00303 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.53■□□□□ 0.56
EIF3FO00303 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.53■□□□□ 0.56
EIF3FO00303 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.53■□□□□ 0.56
EIF3FO00303 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.53■□□□□ 0.56
EIF3FO00303 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
EIF3FO00303 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 HEIH-201ENST00000623091 1652 ntBASIC18.53■□□□□ 0.56
EIF3FO00303 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EIF3FO00303 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
EIF3FO00303 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
EIF3FO00303 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
EIF3FO00303 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.52■□□□□ 0.56
EIF3FO00303 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.52■□□□□ 0.56
EIF3FO00303 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.52■□□□□ 0.56
EIF3FO00303 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.52■□□□□ 0.56
EIF3FO00303 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.52■□□□□ 0.56
EIF3FO00303 REXO1L10P-201ENST00000615707 1290 ntBASIC18.52■□□□□ 0.56
EIF3FO00303 REXO1L12P-201ENST00000622156 912 ntBASIC18.52■□□□□ 0.56
EIF3FO00303 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.52■□□□□ 0.56
EIF3FO00303 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.52■□□□□ 0.56
EIF3FO00303 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EIF3FO00303 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
EIF3FO00303 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EIF3FO00303 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
EIF3FO00303 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EIF3FO00303 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
EIF3FO00303 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
EIF3FO00303 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
EIF3FO00303 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.51■□□□□ 0.55
EIF3FO00303 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.51■□□□□ 0.55
EIF3FO00303 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.51■□□□□ 0.55
EIF3FO00303 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.51■□□□□ 0.55
EIF3FO00303 AP005242.2-201ENST00000580065 1175 ntBASIC18.51■□□□□ 0.55
EIF3FO00303 MIR4785-201ENST00000585005 73 ntBASIC18.51■□□□□ 0.55
EIF3FO00303 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.51■□□□□ 0.55
EIF3FO00303 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
EIF3FO00303 AC068587.9-201ENST00000641814 219 ntBASIC18.51■□□□□ 0.55
EIF3FO00303 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
EIF3FO00303 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.51■□□□□ 0.55
EIF3FO00303 AL512353.2-201ENST00000448759 1962 ntBASIC18.51■□□□□ 0.55
EIF3FO00303 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
EIF3FO00303 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
EIF3FO00303 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EIF3FO00303 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
EIF3FO00303 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.5■□□□□ 0.55
EIF3FO00303 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
EIF3FO00303 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.5■□□□□ 0.55
EIF3FO00303 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EIF3FO00303 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EIF3FO00303 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms