Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPDYE4A6NLX3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.3■■□□□ 1
SPDYE4A6NLX3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 HTR7P1-201ENST00000538670 1336 ntBASIC21.29■■□□□ 1
SPDYE4A6NLX3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 Z82202.1-201ENST00000623446 1880 ntBASIC21.29■■□□□ 1
SPDYE4A6NLX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 AP003071.4-201ENST00000562276 1284 ntBASIC21.29■■□□□ 1
SPDYE4A6NLX3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 AC009113.1-201ENST00000570267 2443 ntBASIC21.29■■□□□ 1
SPDYE4A6NLX3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SPDYE4A6NLX3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SPDYE4A6NLX3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 AC107308.1-201ENST00000615897 301 ntBASIC21.28■■□□□ 1
SPDYE4A6NLX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SPDYE4A6NLX3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SPDYE4A6NLX3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 NBPF21P-201ENST00000425093 1451 ntBASIC21.27■■□□□ 1
SPDYE4A6NLX3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 AL353807.1-201ENST00000427475 662 ntBASIC21.27■■□□□ 1
SPDYE4A6NLX3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms