Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.37□□□□□ -0.27
LINC01546A6NGU7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AL499627.1-201ENST00000569373 2188 ntBASIC13.37□□□□□ -0.27
LINC01546A6NGU7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 AC112777.1-201ENST00000540175 1423 ntBASIC13.37□□□□□ -0.27
LINC01546A6NGU7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01546A6NGU7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 AC013268.1-206ENST00000638368 961 ntBASIC13.36□□□□□ -0.27
LINC01546A6NGU7 AC112229.1-201ENST00000639295 961 ntBASIC13.36□□□□□ -0.27
LINC01546A6NGU7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC01546A6NGU7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 AC020763.4-201ENST00000623414 4170 ntBASIC13.35□□□□□ -0.27
LINC01546A6NGU7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 AL118508.1-201ENST00000613502 2345 ntBASIC13.35□□□□□ -0.27
LINC01546A6NGU7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC01546A6NGU7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms