Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.25■□□□□ 0.19
MEIS3P1A6NDR6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 AC126763.1-201ENST00000552015 2118 ntBASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 AC069236.1-201ENST00000604339 616 ntBASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MEIS3P1A6NDR6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 AC008694.1-202ENST00000636953 945 ntBASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MEIS3P1A6NDR6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 KRT18P11-201ENST00000435214 1283 ntBASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 DUX4L16-201ENST00000555130 1264 ntBASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 AC137761.2-201ENST00000561729 223 ntBASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 AC145350.3-201ENST00000569033 163 ntBASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 AC011767.1-201ENST00000617410 1153 ntBASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MEIS3P1A6NDR6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms