Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 RPL23AP54-201ENST00000495129 419 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 ATP5EP1-201ENST00000510257 156 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 RNU7-116P-201ENST00000516940 62 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.98□□□□□ -1.77
NOD1Q9Y239 AC011603.4-201ENST00000611325 277 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 GABRG2-229ENST00000641017 3628 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNU4-35P-201ENST00000362588 141 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNU6-215P-201ENST00000365169 102 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 Y_RNA.393-201ENST00000383936 102 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNU6-80P-201ENST00000384195 107 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNU6-588P-201ENST00000410281 105 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNU4-43P-201ENST00000410628 137 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 Y_RNA.622-201ENST00000411091 108 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.97□□□□□ -1.77
NOD1Q9Y239 AC008155.2-201ENST00000464337 397 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 TRBV12-2-201ENST00000489763 344 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RPL36AP21-201ENST00000490372 323 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 MRPS36P2-201ENST00000512569 299 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 RNA5SP20-201ENST00000515976 84 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 SNORD59.2-201ENST00000516873 68 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 U4.6-201ENST00000621618 127 ntBASIC3.97□□□□□ -1.77
NOD1Q9Y239 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
NOD1Q9Y239 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.97□□□□□ -1.77
NOD1Q9Y239 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NOD1Q9Y239 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 AP003122.5-201ENST00000527668 3766 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NOD1Q9Y239 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 RNU6-1180P-201ENST00000364935 107 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 AL135786.1-201ENST00000415892 214 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 AC005326.1-201ENST00000429197 123 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 RNU6-437P-201ENST00000459408 95 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 AC010469.1-201ENST00000463864 576 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 AL031274.2-201ENST00000599419 203 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 UCA1.1-201ENST00000620952 75 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 AP003355.3-201ENST00000623465 114 ntBASIC3.96□□□□□ -1.78
NOD1Q9Y239 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NOD1Q9Y239 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NOD1Q9Y239 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NOD1Q9Y239 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 SNORD45.3-201ENST00000363836 72 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 SNORD31B-201ENST00000364977 69 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC004552.1-201ENST00000419089 348 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 RPS26P3-201ENST00000470205 348 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC090543.2-201ENST00000483963 348 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC004057.1-201ENST00000485827 348 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC093663.1-201ENST00000497190 394 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 Y_RNA.686-201ENST00000516548 134 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 RNU6-63P-201ENST00000516690 95 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC015813.4-201ENST00000610469 179 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 AC110079.1-202ENST00000635213 138 ntBASIC3.95□□□□□ -1.78
NOD1Q9Y239 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
NOD1Q9Y239 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NOD1Q9Y239 AL365361.1-201ENST00000566942 3481 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 Y_RNA.111-201ENST00000363248 100 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 MIR591-201ENST00000385290 95 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 SNORA48.2-201ENST00000390926 124 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 MIR1278-201ENST00000408753 81 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 DBIP2-201ENST00000419076 262 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 AC017083.1-201ENST00000428093 483 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 RNU4-57P-201ENST00000515980 135 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 RNU6-948P-201ENST00000516374 107 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 RNU2-56P-201ENST00000516826 190 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 RNU6-586P-201ENST00000517265 104 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 AP001328.1-201ENST00000528550 176 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 AC023043.3-201ENST00000593113 385 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.94□□□□□ -1.78
NOD1Q9Y239 AC091564.4-201ENST00000533934 2194 ntBASIC3.94□□□□□ -1.78
NOD1Q9Y239 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NOD1Q9Y239 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.94□□□□□ -1.78
NOD1Q9Y239 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NOD1Q9Y239 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NOD1Q9Y239 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NOD1Q9Y239 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NOD1Q9Y239 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NOD1Q9Y239 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
NOD1Q9Y239 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.93□□□□□ -1.78
NOD1Q9Y239 MIR128-1-201ENST00000384921 82 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 Y_RNA.587-201ENST00000391210 103 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 SNORA75.5-201ENST00000391291 81 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 SNORA79-201ENST00000408376 140 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 SNRPGP8-201ENST00000454064 226 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 AP001340.1-201ENST00000624405 217 ntBASIC3.93□□□□□ -1.78
NOD1Q9Y239 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NOD1Q9Y239 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NOD1Q9Y239 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.92□□□□□ -1.78
NOD1Q9Y239 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms