Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 A2MP1-204ENST00000566278 4130 ntBASIC7.24□□□□□ -1.25
SENP3Q9H4L4 PCAT14-202ENST00000627127 3935 ntBASIC7.24□□□□□ -1.25
SENP3Q9H4L4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SENP3Q9H4L4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SENP3Q9H4L4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 Y_RNA.333-201ENST00000365274 102 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 SNORA70.10-201ENST00000384515 134 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 RNU6-1254P-201ENST00000391266 104 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 BX276092.1-201ENST00000427368 251 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 SNORA74.3-201ENST00000517108 154 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 YPEL5P3-201ENST00000547227 352 ntBASIC7.23□□□□□ -1.25
SENP3Q9H4L4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SENP3Q9H4L4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 SNORD28B-201ENST00000390993 75 ntBASIC7.22□□□□□ -1.25
SENP3Q9H4L4 RNU1-101P-201ENST00000391171 127 ntBASIC7.22□□□□□ -1.25
SENP3Q9H4L4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SENP3Q9H4L4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SENP3Q9H4L4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 RNU6-525P-201ENST00000363685 104 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 RNA5SP447-201ENST00000363749 119 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 RNA5SP28-201ENST00000363841 119 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 U3.10-201ENST00000364459 214 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 MIR298-201ENST00000401212 88 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 ATP5J2P3-201ENST00000451550 258 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 AC023632.4-201ENST00000517783 191 ntBASIC7.21□□□□□ -1.26
SENP3Q9H4L4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.21□□□□□ -1.26
SENP3Q9H4L4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 MIR208A-201ENST00000362287 71 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 RNA5SP72-201ENST00000364442 117 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 MIR516A2-201ENST00000384888 90 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 MIR516A1-201ENST00000385033 90 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 RN7SL443P-201ENST00000464331 290 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 MIR548AR-201ENST00000582191 57 ntBASIC7.2□□□□□ -1.26
SENP3Q9H4L4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SENP3Q9H4L4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 MIR589-201ENST00000385238 99 ntBASIC7.19□□□□□ -1.26
SENP3Q9H4L4 CST2P1-201ENST00000425770 87 ntBASIC7.19□□□□□ -1.26
SENP3Q9H4L4 snoU13.16-201ENST00000459350 104 ntBASIC7.19□□□□□ -1.26
SENP3Q9H4L4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 MIR6853-201ENST00000619642 74 ntBASIC7.19□□□□□ -1.26
SENP3Q9H4L4 AC140479.6-201ENST00000633535 357 ntBASIC7.19□□□□□ -1.26
SENP3Q9H4L4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SENP3Q9H4L4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 RNY4P3-201ENST00000365254 95 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 RN7SKP220-201ENST00000410611 288 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 SNORD125-201ENST00000459538 96 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 SNORA28-201ENST00000606769 126 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 AC106800.4-201ENST00000614905 153 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 ZYXP1-201ENST00000617638 118 ntBASIC7.18□□□□□ -1.26
SENP3Q9H4L4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SENP3Q9H4L4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms