Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC098869.1-201ENST00000481627 292 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.26□□□□□ -2.05
NPIPB3Q92617 RN7SL504P-201ENST00000494496 287 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 AC008885.1-201ENST00000514930 301 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 RNA5SP76-201ENST00000516277 87 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 AC107016.2-201ENST00000547968 190 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 AC008749.1-201ENST00000597650 306 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.26□□□□□ -2.05
NPIPB3Q92617 AC096577.2-201ENST00000611455 153 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 AC091953.5-201ENST00000622919 233 ntBASIC2.26□□□□□ -2.05
NPIPB3Q92617 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NPIPB3Q92617 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NPIPB3Q92617 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NPIPB3Q92617 snoU2_19.2-201ENST00000363024 80 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 SNORD115-3-201ENST00000363100 82 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 Y_RNA.243-201ENST00000364481 109 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 RNU6-1240P-201ENST00000365155 104 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPIPB3Q92617 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 AL590004.2-201ENST00000404787 371 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 RNU6-1199P-201ENST00000411249 104 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 AC022018.1-201ENST00000430685 241 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 AC025750.2-201ENST00000442609 450 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 PRSS3P4-201ENST00000453323 162 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 SNORA84-201ENST00000459229 133 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 TRBVB-201ENST00000477100 408 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 HMGB3P17-201ENST00000504195 649 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPIPB3Q92617 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 RNU6-570P-201ENST00000517051 105 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 MIR5004-201ENST00000579078 107 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 U4.1-201ENST00000620349 87 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 MIR6733-201ENST00000635723 61 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 U6.115-201ENST00000636045 103 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 IGHVIII-44-202ENST00000636235 289 ntBASIC2.25□□□□□ -2.05
NPIPB3Q92617 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.25□□□□□ -2.05
NPIPB3Q92617 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NPIPB3Q92617 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NPIPB3Q92617 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NPIPB3Q92617 Y_RNA.84-201ENST00000363011 104 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 RNU6-290P-201ENST00000365212 101 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 Y_RNA.376-201ENST00000365638 108 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 RNU6-102P-201ENST00000384485 104 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 MIR215-201ENST00000384858 110 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 RNA5SP270-201ENST00000411361 118 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC007064.1-201ENST00000412238 351 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 POLR2KP2-201ENST00000438155 177 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL109933.2-201ENST00000452651 260 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 HSPE1P25-201ENST00000455484 251 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 SCGB1D5P-201ENST00000515134 247 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 MIR4503-201ENST00000582187 83 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL161756.2-201ENST00000604597 246 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
NPIPB3Q92617 SDR42E1P4-201ENST00000620894 481 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AC127459.3-201ENST00000624328 466 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 AL159152.1-201ENST00000635019 2587 ntBASIC2.24□□□□□ -2.05
NPIPB3Q92617 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NPIPB3Q92617 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNU6-23P-201ENST00000363283 107 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNU6-324P-201ENST00000363957 106 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 SNORD115-30-201ENST00000364117 82 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 SNORD114-6-201ENST00000364393 72 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNU6-1164P-201ENST00000364428 107 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNA5SP72-201ENST00000364442 117 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 Y_RNA.286-201ENST00000364813 102 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 Y_RNA.452-201ENST00000384202 108 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNVU1-14-201ENST00000384770 164 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 MIR7-3-201ENST00000384898 110 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 MIR1253-201ENST00000408273 105 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNU6-1203P-201ENST00000410703 110 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 AC016909.1-201ENST00000415916 166 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 AL353689.1-201ENST00000438895 199 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 RPL23AP3-201ENST00000453844 468 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 RN7SL807P-201ENST00000470923 297 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 AC010598.1-201ENST00000510378 103 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 RNU6-1146P-201ENST00000516282 102 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 SNORA9.3-201ENST00000516383 129 ntBASIC2.23□□□□□ -2.05
NPIPB3Q92617 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.23□□□□□ -2.05
NPIPB3Q92617 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms