Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-376P-201ENST00000384731 106 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 MT-TT-201ENST00000387460 66 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AL139095.1-201ENST00000404326 391 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 RPL30P13-201ENST00000418873 348 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC097463.2-201ENST00000421074 142 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 Z98742.2-201ENST00000431564 187 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC008267.6-201ENST00000441664 139 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC074290.1-201ENST00000448883 135 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC021205.2-201ENST00000480069 347 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP43Q8NFH3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.16□□□□□ -1.9
NUP43Q8NFH3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NUP43Q8NFH3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NUP43Q8NFH3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NUP43Q8NFH3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.15□□□□□ -1.9
NUP43Q8NFH3 SNORD114-7-201ENST00000362520 77 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 RNA5SP205-201ENST00000364653 136 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 MIR513C-201ENST00000401352 84 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.629-201ENST00000411368 105 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 RPS29P4-201ENST00000414733 161 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 AL137159.1-201ENST00000452808 512 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP43Q8NFH3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 RNU6-971P-201ENST00000516920 106 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP43Q8NFH3 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
NUP43Q8NFH3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP43Q8NFH3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUP43Q8NFH3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.261-201ENST00000364631 102 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 U8.7-201ENST00000364940 136 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.337-201ENST00000365312 102 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RNU6-144P-201ENST00000383951 107 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 SNORA20-201ENST00000384662 132 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AL355796.1-201ENST00000406706 323 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AC006461.1-201ENST00000412637 326 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RPL23AP7-203ENST00000449021 469 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AC006539.3-201ENST00000454258 129 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RNU7-197P-201ENST00000458836 62 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RN7SL330P-201ENST00000469709 307 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RNU6-561P-201ENST00000516222 102 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 RPL30P11-203ENST00000598995 310 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 U3.45-201ENST00000607547 219 ntBASIC3.14□□□□□ -1.91
NUP43Q8NFH3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NUP43Q8NFH3 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 RNU6-643P-201ENST00000384018 107 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR183-201ENST00000384958 110 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR15B-201ENST00000385045 98 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR873-201ENST00000401120 77 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AL606845.1-201ENST00000404881 255 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AL121914.1-201ENST00000450188 156 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 RNU7-115P-201ENST00000516433 55 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR4724-201ENST00000579485 89 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AL670379.2-201ENST00000604983 252 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 MIR548AY-201ENST00000617669 107 ntBASIC3.13□□□□□ -1.91
NUP43Q8NFH3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NUP43Q8NFH3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP43Q8NFH3 MIR367-201ENST00000362299 68 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 Y_RNA.127-201ENST00000363386 109 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 RNU6-407P-201ENST00000365280 104 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 SNORD116-13-201ENST00000384408 92 ntBASIC3.12□□□□□ -1.91
NUP43Q8NFH3 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms