Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SNORD115-46-201ENST00000390982 71 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.59□□□□□ -1.99
ITGA8P53708 AC016925.1-201ENST00000458303 298 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.59□□□□□ -1.99
ITGA8P53708 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.59□□□□□ -1.99
ITGA8P53708 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
ITGA8P53708 ATP5EP1-201ENST00000510257 156 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
ITGA8P53708 AC008269.2-201ENST00000561915 1105 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 AC136932.1-201ENST00000574771 208 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 MIR1248-201ENST00000629190 106 ntBASIC2.59□□□□□ -1.99
ITGA8P53708 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ITGA8P53708 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -2
ITGA8P53708 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
ITGA8P53708 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ITGA8P53708 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.58□□□□□ -2
ITGA8P53708 LINC02555-201ENST00000563933 1951 ntBASIC2.58□□□□□ -2
ITGA8P53708 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
ITGA8P53708 Y_RNA.47-201ENST00000362697 108 ntBASIC2.58□□□□□ -2
ITGA8P53708 Y_RNA.144-201ENST00000363521 113 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU6-961P-201ENST00000363893 105 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
ITGA8P53708 Y_RNA.415-201ENST00000384012 112 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU6-463P-201ENST00000384340 107 ntBASIC2.58□□□□□ -2
ITGA8P53708 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
ITGA8P53708 AL357139.1-201ENST00000407792 426 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU6-121P-201ENST00000410525 99 ntBASIC2.58□□□□□ -2
ITGA8P53708 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.58□□□□□ -2
ITGA8P53708 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.58□□□□□ -2
ITGA8P53708 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
ITGA8P53708 RNU6-635P-201ENST00000516651 102 ntBASIC2.58□□□□□ -2
ITGA8P53708 RRN3P3-201ENST00000549207 578 ntBASIC2.58□□□□□ -2
ITGA8P53708 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.58□□□□□ -2
ITGA8P53708 AC018448.1-201ENST00000552843 316 ntBASIC2.58□□□□□ -2
ITGA8P53708 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
ITGA8P53708 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
ITGA8P53708 AC026271.5-201ENST00000577873 130 ntBASIC2.58□□□□□ -2
ITGA8P53708 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
ITGA8P53708 AC011476.5-201ENST00000615594 130 ntBASIC2.58□□□□□ -2
ITGA8P53708 AC130454.1-201ENST00000622948 401 ntBASIC2.58□□□□□ -2
ITGA8P53708 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.58□□□□□ -2
ITGA8P53708 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ITGA8P53708 Y_RNA.105-201ENST00000363182 111 ntBASIC2.57□□□□□ -2
ITGA8P53708 SNORD31B-201ENST00000364977 69 ntBASIC2.57□□□□□ -2
ITGA8P53708 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.57□□□□□ -2
ITGA8P53708 AC005002.2-201ENST00000438228 269 ntBASIC2.57□□□□□ -2
ITGA8P53708 UQCRBP2-201ENST00000447827 297 ntBASIC2.57□□□□□ -2
ITGA8P53708 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.57□□□□□ -2
ITGA8P53708 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.57□□□□□ -2
ITGA8P53708 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.57□□□□□ -2
ITGA8P53708 LINC01399-202ENST00000458450 244 ntBASIC2.57□□□□□ -2
ITGA8P53708 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
ITGA8P53708 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
ITGA8P53708 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
ITGA8P53708 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.57□□□□□ -2
ITGA8P53708 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
ITGA8P53708 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
ITGA8P53708 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ITGA8P53708 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ITGA8P53708 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
ITGA8P53708 AC062016.1-201ENST00000355719 319 ntBASIC2.56□□□□□ -2
ITGA8P53708 U3.8-201ENST00000363675 217 ntBASIC2.56□□□□□ -2
ITGA8P53708 RNU6-1264P-201ENST00000383891 107 ntBASIC2.56□□□□□ -2
ITGA8P53708 RNA5SP184-201ENST00000411071 108 ntBASIC2.56□□□□□ -2
ITGA8P53708 SRIP3-201ENST00000413200 219 ntBASIC2.56□□□□□ -2
ITGA8P53708 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
ITGA8P53708 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
ITGA8P53708 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
ITGA8P53708 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
ITGA8P53708 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
ITGA8P53708 RNU6-397P-201ENST00000516226 104 ntBASIC2.56□□□□□ -2
ITGA8P53708 AL161670.1-201ENST00000554348 137 ntBASIC2.56□□□□□ -2
ITGA8P53708 MIR4300-201ENST00000581016 96 ntBASIC2.56□□□□□ -2
ITGA8P53708 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.56□□□□□ -2
ITGA8P53708 MIR8062-201ENST00000621515 85 ntBASIC2.56□□□□□ -2
ITGA8P53708 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.56□□□□□ -2
ITGA8P53708 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
ITGA8P53708 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
ITGA8P53708 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ITGA8P53708 Y_RNA.19-201ENST00000362462 99 ntBASIC2.55□□□□□ -2
ITGA8P53708 Y_RNA.26-201ENST00000362539 101 ntBASIC2.55□□□□□ -2
ITGA8P53708 RNU6-727P-201ENST00000363592 107 ntBASIC2.55□□□□□ -2
ITGA8P53708 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
ITGA8P53708 RNU6-806P-201ENST00000365147 105 ntBASIC2.55□□□□□ -2
ITGA8P53708 Y_RNA.332-201ENST00000365271 113 ntBASIC2.55□□□□□ -2
ITGA8P53708 RNU6-926P-201ENST00000384075 107 ntBASIC2.55□□□□□ -2
ITGA8P53708 Y_RNA.570-201ENST00000384750 101 ntBASIC2.55□□□□□ -2
ITGA8P53708 AL033519.2-201ENST00000403958 392 ntBASIC2.55□□□□□ -2
ITGA8P53708 MIR1283-1-201ENST00000408494 87 ntBASIC2.55□□□□□ -2
ITGA8P53708 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ITGA8P53708 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
ITGA8P53708 RAB28P5-201ENST00000427490 651 ntBASIC2.55□□□□□ -2
ITGA8P53708 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
ITGA8P53708 AL137159.1-201ENST00000452808 512 ntBASIC2.55□□□□□ -2
ITGA8P53708 SNORD109B-201ENST00000458961 67 ntBASIC2.55□□□□□ -2
ITGA8P53708 SNORD109A-201ENST00000459128 67 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms