Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 RNA5SP153-201ENST00000516498 76 ntBASIC3.4□□□□□ -1.87
CTSBP07858 Y_RNA.692-201ENST00000516627 105 ntBASIC3.4□□□□□ -1.87
CTSBP07858 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
CTSBP07858 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CTSBP07858 uc_338.32-201ENST00000615087 172 ntBASIC3.4□□□□□ -1.87
CTSBP07858 U6.95-201ENST00000636931 70 ntBASIC3.4□□□□□ -1.87
CTSBP07858 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.4□□□□□ -1.87
CTSBP07858 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CTSBP07858 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTSBP07858 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CTSBP07858 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CTSBP07858 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 OTUD4P1-201ENST00000237841 3067 ntBASIC3.39□□□□□ -1.87
CTSBP07858 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 AL356292.1-201ENST00000283110 373 ntBASIC3.39□□□□□ -1.87
CTSBP07858 Y_RNA.120-201ENST00000363304 110 ntBASIC3.39□□□□□ -1.87
CTSBP07858 RNU6-484P-201ENST00000384016 107 ntBASIC3.39□□□□□ -1.87
CTSBP07858 SNORA72-201ENST00000384339 132 ntBASIC3.39□□□□□ -1.87
CTSBP07858 AL353705.1-201ENST00000433468 480 ntBASIC3.39□□□□□ -1.87
CTSBP07858 AL031183.1-201ENST00000457667 207 ntBASIC3.39□□□□□ -1.87
CTSBP07858 AC016925.1-201ENST00000458303 298 ntBASIC3.39□□□□□ -1.87
CTSBP07858 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
CTSBP07858 RNU7-107P-201ENST00000459121 61 ntBASIC3.39□□□□□ -1.87
CTSBP07858 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
CTSBP07858 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.39□□□□□ -1.87
CTSBP07858 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.39□□□□□ -1.87
CTSBP07858 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTSBP07858 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
CTSBP07858 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTSBP07858 RNU4-35P-201ENST00000362588 141 ntBASIC3.38□□□□□ -1.87
CTSBP07858 RNA5SP322-201ENST00000363617 119 ntBASIC3.38□□□□□ -1.87
CTSBP07858 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
CTSBP07858 RNU6-978P-201ENST00000364371 103 ntBASIC3.38□□□□□ -1.87
CTSBP07858 SNORD14D-201ENST00000384390 87 ntBASIC3.38□□□□□ -1.87
CTSBP07858 SNORA26-201ENST00000391286 122 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AL138878.1-201ENST00000405131 347 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AL158823.1-201ENST00000418441 478 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSBP07858 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.38□□□□□ -1.87
CTSBP07858 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
CTSBP07858 Y_RNA.709-201ENST00000516952 92 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AC025647.1-201ENST00000517879 253 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AC107934.2-201ENST00000518653 310 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
CTSBP07858 AL031274.2-201ENST00000599419 203 ntBASIC3.38□□□□□ -1.87
CTSBP07858 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
CTSBP07858 MIR3914-2-201ENST00000637339 95 ntBASIC3.38□□□□□ -1.87
CTSBP07858 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSBP07858 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CTSBP07858 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.38□□□□□ -1.87
CTSBP07858 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTSBP07858 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.38□□□□□ -1.87
CTSBP07858 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSBP07858 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.37□□□□□ -1.87
CTSBP07858 RNU6-117P-201ENST00000365415 107 ntBASIC3.37□□□□□ -1.87
CTSBP07858 RNVU1-14-201ENST00000384770 164 ntBASIC3.37□□□□□ -1.87
CTSBP07858 MIR7-3-201ENST00000384898 110 ntBASIC3.37□□□□□ -1.87
CTSBP07858 SNORD17-201ENST00000390930 237 ntBASIC3.37□□□□□ -1.87
CTSBP07858 RNY4P18-201ENST00000391107 89 ntBASIC3.37□□□□□ -1.87
CTSBP07858 PRSS3P4-201ENST00000453323 162 ntBASIC3.37□□□□□ -1.87
CTSBP07858 SNRPGP3-201ENST00000469405 227 ntBASIC3.37□□□□□ -1.87
CTSBP07858 CYCTP-201ENST00000504253 315 ntBASIC3.37□□□□□ -1.87
CTSBP07858 RN7SKP83-201ENST00000516512 178 ntBASIC3.37□□□□□ -1.87
CTSBP07858 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.37□□□□□ -1.87
CTSBP07858 AC110741.2-201ENST00000605278 268 ntBASIC3.37□□□□□ -1.87
CTSBP07858 MIR486-1-201ENST00000612171 68 ntBASIC3.37□□□□□ -1.87
CTSBP07858 MIR7975-201ENST00000619350 68 ntBASIC3.37□□□□□ -1.87
CTSBP07858 GABRG2-229ENST00000641017 3628 ntBASIC3.37□□□□□ -1.87
CTSBP07858 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.37□□□□□ -1.87
CTSBP07858 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTSBP07858 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTSBP07858 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.37□□□□□ -1.87
CTSBP07858 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTSBP07858 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CTSBP07858 SNORD46.1-201ENST00000364139 104 ntBASIC3.36□□□□□ -1.87
CTSBP07858 RNU6-755P-201ENST00000364400 103 ntBASIC3.36□□□□□ -1.87
CTSBP07858 RNU6-1240P-201ENST00000365155 104 ntBASIC3.36□□□□□ -1.87
CTSBP07858 RNU6-136P-201ENST00000384663 107 ntBASIC3.36□□□□□ -1.87
CTSBP07858 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSBP07858 RPL39P40-201ENST00000445481 146 ntBASIC3.36□□□□□ -1.87
CTSBP07858 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
CTSBP07858 AC015720.1-201ENST00000565251 277 ntBASIC3.36□□□□□ -1.87
CTSBP07858 MIR4644-201ENST00000579929 84 ntBASIC3.36□□□□□ -1.87
CTSBP07858 AC131055.1-201ENST00000584626 316 ntBASIC3.36□□□□□ -1.87
CTSBP07858 AC097639.2-201ENST00000603159 172 ntBASIC3.36□□□□□ -1.87
CTSBP07858 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.36□□□□□ -1.87
CTSBP07858 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.36□□□□□ -1.87
CTSBP07858 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTSBP07858 TNPO1P3-201ENST00000436471 2662 ntBASIC3.36□□□□□ -1.87
CTSBP07858 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTSBP07858 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTSBP07858 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSBP07858 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTSBP07858 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CTSBP07858 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms