Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNY3P5-201ENST00000384127 102 ntBASIC3.65□□□□□ -1.83
SOX1O00570 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
SOX1O00570 RNA5SP104-201ENST00000410989 118 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC004552.1-201ENST00000419089 348 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX1O00570 RPS26P3-201ENST00000470205 348 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC090543.2-201ENST00000483963 348 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC004057.1-201ENST00000485827 348 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC025445.1-201ENST00000502728 300 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC008885.1-201ENST00000514930 301 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX1O00570 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
SOX1O00570 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
SOX1O00570 AC012640.5-201ENST00000623897 319 ntBASIC3.65□□□□□ -1.83
SOX1O00570 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SOX1O00570 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.83
SOX1O00570 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.65□□□□□ -1.83
SOX1O00570 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SOX1O00570 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SOX1O00570 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 AC000403.1-201ENST00000613696 3585 ntBASIC3.64□□□□□ -1.83
SOX1O00570 Y_RNA.521-201ENST00000384560 114 ntBASIC3.64□□□□□ -1.83
SOX1O00570 SNORA12-201ENST00000391162 147 ntBASIC3.64□□□□□ -1.83
SOX1O00570 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX1O00570 RPS27P1-201ENST00000450552 247 ntBASIC3.64□□□□□ -1.83
SOX1O00570 EEF1B2P7-201ENST00000451177 676 ntBASIC3.64□□□□□ -1.83
SOX1O00570 RN7SKP132-201ENST00000516001 208 ntBASIC3.64□□□□□ -1.83
SOX1O00570 RNU7-115P-201ENST00000516433 55 ntBASIC3.64□□□□□ -1.83
SOX1O00570 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX1O00570 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX1O00570 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX1O00570 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX1O00570 ZNF702P-202ENST00000434269 1966 ntBASIC3.63□□□□□ -1.83
SOX1O00570 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX1O00570 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.63□□□□□ -1.83
SOX1O00570 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX1O00570 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX1O00570 RNU6-1180P-201ENST00000364935 107 ntBASIC3.63□□□□□ -1.83
SOX1O00570 SNORA51.4-201ENST00000364993 124 ntBASIC3.63□□□□□ -1.83
SOX1O00570 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SOX1O00570 RNU6-768P-201ENST00000384683 107 ntBASIC3.63□□□□□ -1.83
SOX1O00570 SNORA36B-201ENST00000410438 131 ntBASIC3.63□□□□□ -1.83
SOX1O00570 RNU4-43P-201ENST00000410628 137 ntBASIC3.63□□□□□ -1.83
SOX1O00570 RNU6-383P-201ENST00000410864 94 ntBASIC3.63□□□□□ -1.83
SOX1O00570 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX1O00570 HSPE1P13-201ENST00000451143 297 ntBASIC3.63□□□□□ -1.83
SOX1O00570 RN7SL863P-201ENST00000462370 296 ntBASIC3.63□□□□□ -1.83
SOX1O00570 AC117454.1-201ENST00000491120 168 ntBASIC3.63□□□□□ -1.83
SOX1O00570 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX1O00570 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.63□□□□□ -1.83
SOX1O00570 AP001328.1-201ENST00000528550 176 ntBASIC3.63□□□□□ -1.83
SOX1O00570 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX1O00570 MIR548AY-201ENST00000617669 107 ntBASIC3.63□□□□□ -1.83
SOX1O00570 AC068647.2-201ENST00000637380 353 ntBASIC3.63□□□□□ -1.83
SOX1O00570 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX1O00570 AL159152.1-201ENST00000635019 2587 ntBASIC3.63□□□□□ -1.83
SOX1O00570 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX1O00570 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX1O00570 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SOX1O00570 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SOX1O00570 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX1O00570 AC110774.1-201ENST00000623567 2018 ntBASIC3.62□□□□□ -1.83
SOX1O00570 Y_RNA.393-201ENST00000383936 102 ntBASIC3.62□□□□□ -1.83
SOX1O00570 RNU6-1056P-201ENST00000383996 107 ntBASIC3.62□□□□□ -1.83
SOX1O00570 Y_RNA.563-201ENST00000384707 108 ntBASIC3.62□□□□□ -1.83
SOX1O00570 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.62□□□□□ -1.83
SOX1O00570 RNU6-460P-201ENST00000391158 108 ntBASIC3.62□□□□□ -1.83
SOX1O00570 NDUFB1P1-201ENST00000435191 180 ntBASIC3.62□□□□□ -1.83
SOX1O00570 AL603825.1-201ENST00000438481 80 ntBASIC3.62□□□□□ -1.83
SOX1O00570 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX1O00570 snoU13.26-201ENST00000459452 105 ntBASIC3.62□□□□□ -1.83
SOX1O00570 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
SOX1O00570 RNU6-659P-201ENST00000516454 104 ntBASIC3.62□□□□□ -1.83
SOX1O00570 RNU2-56P-201ENST00000516826 190 ntBASIC3.62□□□□□ -1.83
SOX1O00570 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX1O00570 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX1O00570 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.61□□□□□ -1.83
SOX1O00570 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
SOX1O00570 RNU6-153P-201ENST00000364422 104 ntBASIC3.61□□□□□ -1.83
SOX1O00570 SNORD32B-201ENST00000364460 84 ntBASIC3.61□□□□□ -1.83
SOX1O00570 SNORA70B-201ENST00000384210 135 ntBASIC3.61□□□□□ -1.83
SOX1O00570 MIR518C-201ENST00000384822 101 ntBASIC3.61□□□□□ -1.83
SOX1O00570 MIR873-201ENST00000401120 77 ntBASIC3.61□□□□□ -1.83
SOX1O00570 RNU6-588P-201ENST00000410281 105 ntBASIC3.61□□□□□ -1.83
SOX1O00570 RNA5SP38-201ENST00000410750 119 ntBASIC3.61□□□□□ -1.83
SOX1O00570 RNA5SP39-201ENST00000411245 120 ntBASIC3.61□□□□□ -1.83
SOX1O00570 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX1O00570 RPL23AP7-203ENST00000449021 469 ntBASIC3.61□□□□□ -1.83
SOX1O00570 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
SOX1O00570 CENPBD1P1-201ENST00000464061 469 ntBASIC3.61□□□□□ -1.83
SOX1O00570 RNU5F-4P-201ENST00000516581 114 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms