Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 RPL21P129-201ENST00000491732 478 ntBASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 RNU7-172P-201ENST00000517125 64 ntBASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 MIR4438-201ENST00000585271 93 ntBASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 AC002064.3-201ENST00000623448 346 ntBASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.22□□□□□ -1.89
CDPF1Q6NVV7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CDPF1Q6NVV7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 SNORA37-201ENST00000384504 129 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RNY4P30-201ENST00000410216 95 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC002075.2-201ENST00000425207 252 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 ARF4P2-201ENST00000430209 526 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC083863.1-201ENST00000438811 231 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RN7SL354P-201ENST00000469282 294 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RAC1P2-201ENST00000511164 579 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RNA5SP236-201ENST00000516169 116 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 RNU6-504P-201ENST00000516568 104 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC090115.4-201ENST00000609970 188 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 JPX_2.1-201ENST00000614161 69 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 AC058791.1-201ENST00000608412 3198 ntBASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.21□□□□□ -1.9
CDPF1Q6NVV7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RNA5SP505-201ENST00000364748 108 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RPL23AP52-201ENST00000439311 478 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 snoU13.1-201ENST00000459157 104 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RPS29P21-201ENST00000496272 170 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RNU6-586P-201ENST00000517265 104 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 AP001880.2-201ENST00000538233 448 ntBASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDPF1Q6NVV7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 MFSD8-236ENST00000641509 4050 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 SNORA70.2-201ENST00000364506 135 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 Y_RNA.528-201ENST00000384575 108 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 MIR1263-201ENST00000408324 86 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RNU6-554P-201ENST00000410466 106 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RNA5SP136-201ENST00000410906 107 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 AL645608.4-201ENST00000423619 154 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RPL18P10-201ENST00000425606 538 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RNU1-6P-201ENST00000516290 144 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RNU6-113P-201ENST00000516653 101 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 TVP23BP1-201ENST00000557500 617 ntBASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.19□□□□□ -1.9
CDPF1Q6NVV7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 RNU6-1107P-201ENST00000364817 104 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 SNORA74C-2-201ENST00000411179 201 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 HMGN2P18-201ENST00000450680 270 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 RN7SL303P-201ENST00000469773 251 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 RN7SL459P-201ENST00000481078 302 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 PARP1P2-201ENST00000556806 195 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 AC007012.1-201ENST00000567192 175 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 MIR3129-201ENST00000581095 76 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms