Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RPL30P12-201ENST00000474666 353 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 UBL5P3-201ENST00000475112 231 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.97□□□□□ -1.93
SF3B3Q15393 Y_RNA.673-201ENST00000516306 88 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 RNU6-58P-201ENST00000517143 103 ntBASIC2.97□□□□□ -1.93
SF3B3Q15393 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.97□□□□□ -1.93
SF3B3Q15393 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.97□□□□□ -1.93
SF3B3Q15393 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SF3B3Q15393 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
SF3B3Q15393 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.93
SF3B3Q15393 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.96□□□□□ -1.94
SF3B3Q15393 Y_RNA.20-201ENST00000362479 113 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNA5SP361-201ENST00000362686 118 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNU6-879P-201ENST00000364328 108 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 Y_RNA.237-201ENST00000364439 102 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNU6-281P-201ENST00000384212 103 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNU6-541P-201ENST00000384709 110 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNU6-159P-201ENST00000391080 106 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 PTGES3P4-201ENST00000426243 356 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 AL358075.3-201ENST00000426289 226 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 WARS2P1-201ENST00000429678 537 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 AC004383.1-201ENST00000438135 289 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.96□□□□□ -1.94
SF3B3Q15393 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.96□□□□□ -1.94
SF3B3Q15393 AP000705.1-201ENST00000454567 350 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RPS23P5-201ENST00000495419 428 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 SNORA31.6-201ENST00000516241 130 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 RNU5B-3P-201ENST00000516601 115 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 IGKV3-31-201ENST00000523109 329 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.96□□□□□ -1.94
SF3B3Q15393 UBL5P4-201ENST00000562584 236 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 AL078605.1-201ENST00000603529 500 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.96□□□□□ -1.94
SF3B3Q15393 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SF3B3Q15393 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SF3B3Q15393 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.96□□□□□ -1.94
SF3B3Q15393 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SF3B3Q15393 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SF3B3Q15393 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 AL391987.6-201ENST00000305671 199 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 Y_RNA.416-201ENST00000384014 113 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RNU6-937P-201ENST00000384325 106 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RNU6-748P-201ENST00000384648 107 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RNU2-20P-201ENST00000410425 191 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 SNORD12B-201ENST00000410433 91 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RNU6-1140P-201ENST00000410517 106 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RPS26P42-201ENST00000413485 326 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RPS12P2-201ENST00000439728 269 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.95□□□□□ -1.94
SF3B3Q15393 snoU13.6-201ENST00000458785 104 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RN7SKP49-201ENST00000516675 260 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 RNU6-1198P-201ENST00000516904 67 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.95□□□□□ -1.94
SF3B3Q15393 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.95□□□□□ -1.94
SF3B3Q15393 AL138963.2-201ENST00000605137 226 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 AC005296.1-201ENST00000616145 209 ntBASIC2.95□□□□□ -1.94
SF3B3Q15393 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-1159P-201ENST00000362933 107 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-926P-201ENST00000384075 107 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 SNORD63-201ENST00000384262 68 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 Y_RNA.541-201ENST00000384640 113 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-19P-201ENST00000384718 107 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 MIR548H3-201ENST00000408771 118 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 CYCSP48-201ENST00000417124 323 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 AC012306.1-201ENST00000423267 114 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 RPL26P26-201ENST00000480251 434 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-1338P-201ENST00000516328 91 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 SNORA31.16-201ENST00000516773 139 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-111P-201ENST00000517179 105 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 DEFB108E-201ENST00000524692 240 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 AC115990.1-201ENST00000526957 301 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 MIR5695-201ENST00000579717 85 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 MIR5007-201ENST00000583098 95 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 AC010900.2-201ENST00000604508 210 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 RNU6-91P-201ENST00000607774 107 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 AC067747.1-201ENST00000608026 250 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.94□□□□□ -1.94
SF3B3Q15393 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SF3B3Q15393 AC002543.1-201ENST00000299783 1954 ntBASIC2.94□□□□□ -1.94
SF3B3Q15393 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SF3B3Q15393 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
SF3B3Q15393 Y_RNA.16-201ENST00000362421 102 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 SNORD113-8-201ENST00000363497 74 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU6-461P-201ENST00000364195 107 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU6-1145P-201ENST00000384246 107 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU6-102P-201ENST00000384485 104 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 Y_RNA.539-201ENST00000384635 107 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 MIR329-1-201ENST00000385028 80 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 MIR504-201ENST00000385065 83 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU2-49P-201ENST00000410666 184 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU2-64P-201ENST00000411315 191 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 HMGB1P35-201ENST00000503360 598 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 MRPS36P2-201ENST00000512569 299 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 RNU6-496P-201ENST00000516145 99 ntBASIC2.93□□□□□ -1.94
SF3B3Q15393 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.93□□□□□ -1.94
SF3B3Q15393 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms