Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MIR4307-201ENST00000582802 84 ntBASIC-0.31□□□□□ -2.46
RPS28P62857 AL117336.2-201ENST00000602435 335 ntBASIC-0.31□□□□□ -2.46
RPS28P62857 AC022709.1-201ENST00000615967 87 ntBASIC-0.31□□□□□ -2.46
RPS28P62857 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.31□□□□□ -2.46
RPS28P62857 SNORD114-26-201ENST00000363543 72 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 RNA5SP517-201ENST00000364724 117 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 RNU6-298P-201ENST00000390888 96 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 RNU6-679P-201ENST00000391003 106 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 AL136310.1-201ENST00000404926 654 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 AC137499.1-201ENST00000427602 88 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 AP003716.2-201ENST00000528260 108 ntBASIC-0.32□□□□□ -2.46
RPS28P62857 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.32□□□□□ -2.46
RPS28P62857 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.32□□□□□ -2.46
RPS28P62857 RNU6-433P-201ENST00000363216 104 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 SNORD113.3-201ENST00000364630 78 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 RNA5SP128-201ENST00000365305 116 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 RNU6-39P-201ENST00000384344 107 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 MIR644A-201ENST00000385262 94 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 RNU6-700P-201ENST00000391043 107 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 AL117339.3-201ENST00000418733 162 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 RPS24P1-201ENST00000438550 371 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.33□□□□□ -2.46
RPS28P62857 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
RPS28P62857 RPL23AP54-201ENST00000495129 419 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 AC116347.2-201ENST00000514912 523 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 SNORA40.12-201ENST00000516329 111 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.33□□□□□ -2.46
RPS28P62857 MIR3612-201ENST00000579753 87 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 MIR3945-201ENST00000581853 98 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 MIR4305-201ENST00000583252 102 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 AP001836.1-201ENST00000604675 523 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 SNORA25.18-201ENST00000607153 114 ntBASIC-0.33□□□□□ -2.46
RPS28P62857 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.33□□□□□ -2.46
RPS28P62857 MIR520G-201ENST00000385064 90 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 MIR520H-201ENST00000385126 88 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 RNU6-387P-201ENST00000411331 105 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 SNORD83.1-201ENST00000411362 77 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.34□□□□□ -2.46
RPS28P62857 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.34□□□□□ -2.46
RPS28P62857 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.34□□□□□ -2.46
RPS28P62857 RNU2-56P-201ENST00000516826 190 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.34□□□□□ -2.46
RPS28P62857 MIR3118-1-201ENST00000581787 76 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 AC007742.2-201ENST00000618226 398 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 uc_338.16-201ENST00000621804 95 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 AC010487.4-201ENST00000637027 61 ntBASIC-0.34□□□□□ -2.46
RPS28P62857 RNU6-61P-201ENST00000365528 109 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 AL139396.1-201ENST00000421137 167 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 AC119618.1-201ENST00000434191 222 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.35□□□□□ -2.47
RPS28P62857 RNU6-221P-201ENST00000459541 99 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 RPS3AP17-201ENST00000472594 777 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 RNU4-77P-201ENST00000516692 156 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 RNU6-685P-201ENST00000517088 95 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPS28P62857 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPS28P62857 AC093027.1-201ENST00000546698 429 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.35□□□□□ -2.47
RPS28P62857 AC103996.1-201ENST00000555468 102 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 MIR548AO-201ENST00000579992 96 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 MIR4452-201ENST00000583004 71 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 AF131215.7-201ENST00000602443 707 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 AC007684.1-201ENST00000609671 477 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 U6.73-201ENST00000619194 103 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 AC006386.1-201ENST00000619436 415 ntBASIC-0.35□□□□□ -2.47
RPS28P62857 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 RNU6-116P-201ENST00000384042 109 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 SNORA2B-201ENST00000384583 137 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 MIR526A1-201ENST00000384897 85 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 MED13P1-201ENST00000428342 171 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 AL596276.1-201ENST00000434465 418 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 MTATP6P16-201ENST00000434543 526 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 HSFY5P-201ENST00000453726 309 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 RN7SKP164-201ENST00000516138 266 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC-0.36□□□□□ -2.47
RPS28P62857 MIR4298-201ENST00000584380 73 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 AC104695.3-201ENST00000604052 296 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 AP000907.4-201ENST00000604143 237 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 AL139022.2-201ENST00000606934 443 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 MIR6504-201ENST00000613520 61 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 RMST_2.1-201ENST00000617263 136 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.36□□□□□ -2.47
RPS28P62857 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.36□□□□□ -2.47
RPS28P62857 RNU6-179P-201ENST00000363350 107 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 RNU6-827P-201ENST00000365553 106 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 RNA5SP63-201ENST00000391225 112 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.37□□□□□ -2.47
RPS28P62857 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 MTCO3P8-201ENST00000453691 755 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.37□□□□□ -2.47
RPS28P62857 AC104136.1-201ENST00000512969 394 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 RNU7-28P-201ENST00000516759 62 ntBASIC-0.37□□□□□ -2.47
RPS28P62857 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms