Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SNORA46-201ENST00000384762 135 ntBASIC2.87□□□□□ -1.95
PER3P56645 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PER3P56645 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PER3P56645 RNU6-1199P-201ENST00000411249 104 ntBASIC2.87□□□□□ -1.95
PER3P56645 RPL19P1-201ENST00000411635 428 ntBASIC2.87□□□□□ -1.95
PER3P56645 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.87□□□□□ -1.95
PER3P56645 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.87□□□□□ -1.95
PER3P56645 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.87□□□□□ -1.95
PER3P56645 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
PER3P56645 RNU6-1098P-201ENST00000516772 96 ntBASIC2.87□□□□□ -1.95
PER3P56645 SCARNA24.2-201ENST00000516968 130 ntBASIC2.87□□□□□ -1.95
PER3P56645 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
PER3P56645 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.87□□□□□ -1.95
PER3P56645 AC004467.1-201ENST00000615678 330 ntBASIC2.87□□□□□ -1.95
PER3P56645 AC091932.3-201ENST00000624223 323 ntBASIC2.87□□□□□ -1.95
PER3P56645 AC068205.3-201ENST00000636385 468 ntBASIC2.87□□□□□ -1.95
PER3P56645 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.87□□□□□ -1.95
PER3P56645 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.87□□□□□ -1.95
PER3P56645 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PER3P56645 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 AC135776.4-201ENST00000624300 1904 ntBASIC2.87□□□□□ -1.95
PER3P56645 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
PER3P56645 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.86□□□□□ -1.95
PER3P56645 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.86□□□□□ -1.95
PER3P56645 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.86□□□□□ -1.95
PER3P56645 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
PER3P56645 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.86□□□□□ -1.95
PER3P56645 MIR410-201ENST00000362222 80 ntBASIC2.86□□□□□ -1.95
PER3P56645 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
PER3P56645 Y_RNA.539-201ENST00000384635 107 ntBASIC2.86□□□□□ -1.95
PER3P56645 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.86□□□□□ -1.95
PER3P56645 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
PER3P56645 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.86□□□□□ -1.95
PER3P56645 RNU1-117P-201ENST00000517041 158 ntBASIC2.86□□□□□ -1.95
PER3P56645 MIR3162-201ENST00000581818 82 ntBASIC2.86□□□□□ -1.95
PER3P56645 ELOCP29-201ENST00000588193 334 ntBASIC2.86□□□□□ -1.95
PER3P56645 AC069294.1-201ENST00000608397 350 ntBASIC2.86□□□□□ -1.95
PER3P56645 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.86□□□□□ -1.95
PER3P56645 MIR622-201ENST00000638396 96 ntBASIC2.86□□□□□ -1.95
PER3P56645 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
PER3P56645 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PER3P56645 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.85□□□□□ -1.95
PER3P56645 MIR449A-201ENST00000362113 91 ntBASIC2.85□□□□□ -1.95
PER3P56645 Y_RNA.20-201ENST00000362479 113 ntBASIC2.85□□□□□ -1.95
PER3P56645 RNU1-70P-201ENST00000362618 164 ntBASIC2.85□□□□□ -1.95
PER3P56645 RNU6-454P-201ENST00000364292 107 ntBASIC2.85□□□□□ -1.95
PER3P56645 Y_RNA.416-201ENST00000384014 113 ntBASIC2.85□□□□□ -1.95
PER3P56645 SNORA7.4-201ENST00000384249 137 ntBASIC2.85□□□□□ -1.95
PER3P56645 RNU6-21P-201ENST00000384710 107 ntBASIC2.85□□□□□ -1.95
PER3P56645 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
PER3P56645 AL603910.2-201ENST00000407268 136 ntBASIC2.85□□□□□ -1.95
PER3P56645 AL390729.2-201ENST00000416137 156 ntBASIC2.85□□□□□ -1.95
PER3P56645 AC080013.2-201ENST00000460866 323 ntBASIC2.85□□□□□ -1.95
PER3P56645 SERF1AP1-201ENST00000514575 187 ntBASIC2.85□□□□□ -1.95
PER3P56645 RNU6-586P-201ENST00000517265 104 ntBASIC2.85□□□□□ -1.95
PER3P56645 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.85□□□□□ -1.95
PER3P56645 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
PER3P56645 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.85□□□□□ -1.95
PER3P56645 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
PER3P56645 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PER3P56645 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
PER3P56645 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PER3P56645 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.95
PER3P56645 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
PER3P56645 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.84□□□□□ -1.95
PER3P56645 Y_RNA.257-201ENST00000364596 102 ntBASIC2.84□□□□□ -1.95
PER3P56645 SNORA20.1-201ENST00000364790 130 ntBASIC2.84□□□□□ -1.95
PER3P56645 Y_RNA.331-201ENST00000365267 102 ntBASIC2.84□□□□□ -1.95
PER3P56645 RNU6-847P-201ENST00000411115 108 ntBASIC2.84□□□□□ -1.95
PER3P56645 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.84□□□□□ -1.95
PER3P56645 AC083906.5-201ENST00000503722 328 ntBASIC2.84□□□□□ -1.95
PER3P56645 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
PER3P56645 RNA5SP356-201ENST00000515972 94 ntBASIC2.84□□□□□ -1.95
PER3P56645 RNA5SP76-201ENST00000516277 87 ntBASIC2.84□□□□□ -1.95
PER3P56645 RNU6-111P-201ENST00000517179 105 ntBASIC2.84□□□□□ -1.95
PER3P56645 SNORA31.26-201ENST00000517250 137 ntBASIC2.84□□□□□ -1.95
PER3P56645 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.84□□□□□ -1.95
PER3P56645 AC018630.3-201ENST00000542637 96 ntBASIC2.84□□□□□ -1.95
PER3P56645 AC008749.1-201ENST00000597650 306 ntBASIC2.84□□□□□ -1.95
PER3P56645 AL109918.3-201ENST00000603072 338 ntBASIC2.84□□□□□ -1.95
PER3P56645 RPL17P51-201ENST00000605218 238 ntBASIC2.84□□□□□ -1.95
PER3P56645 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
PER3P56645 AL590240.4-201ENST00000616908 390 ntBASIC2.84□□□□□ -1.95
PER3P56645 MIR3674-201ENST00000636576 68 ntBASIC2.84□□□□□ -1.95
PER3P56645 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PER3P56645 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
PER3P56645 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
PER3P56645 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PER3P56645 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.83□□□□□ -1.96
PER3P56645 Y_RNA.352-201ENST00000365439 102 ntBASIC2.83□□□□□ -1.96
PER3P56645 SNORD15B-201ENST00000384714 146 ntBASIC2.83□□□□□ -1.96
PER3P56645 MIR95-201ENST00000385072 81 ntBASIC2.83□□□□□ -1.96
PER3P56645 RNU6-220P-201ENST00000390919 107 ntBASIC2.83□□□□□ -1.96
PER3P56645 MIR1294-201ENST00000408503 142 ntBASIC2.83□□□□□ -1.96
PER3P56645 MIR548H3-201ENST00000408771 118 ntBASIC2.83□□□□□ -1.96
PER3P56645 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.83□□□□□ -1.96
PER3P56645 AC104332.2-201ENST00000429959 156 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms