Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC006989.1-201ENST00000427212 131 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 RNU7-57P-201ENST00000459540 60 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 RNU6-965P-201ENST00000516721 96 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 RNU6-861P-201ENST00000516745 106 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 AP005660.1-201ENST00000522972 293 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 YPEL5P2-201ENST00000605553 359 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 MIR5739-201ENST00000619803 80 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 MIR8057-201ENST00000620957 69 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC12P31275 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
HOXC12P31275 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC12P31275 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
HOXC12P31275 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC12P31275 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXC12P31275 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.9
HOXC12P31275 Y_RNA.500-201ENST00000384466 111 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HOXC12P31275 RNU6-710P-201ENST00000410424 105 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC12P31275 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC12P31275 ATP5EP1-201ENST00000510257 156 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 RPL23AP94-201ENST00000512518 302 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 AL137100.2-201ENST00000555786 315 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC12P31275 AL008718.3-201ENST00000610217 321 ntBASIC3.15□□□□□ -1.91
HOXC12P31275 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC12P31275 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC12P31275 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC12P31275 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC12P31275 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 SNORA38.1-201ENST00000364172 131 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 SNORD56.5-201ENST00000364281 72 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 SNORD14D-201ENST00000384390 87 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 RNU6-493P-201ENST00000391321 108 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 MIR548M-201ENST00000408260 86 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC005326.1-201ENST00000429197 123 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC074290.1-201ENST00000448883 135 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 Y_RNA.637-201ENST00000459424 114 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC114982.1-201ENST00000469402 321 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC109925.1-201ENST00000478069 331 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC12P31275 RN7SKP40-201ENST00000517211 242 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXC12P31275 AC072026.1-201ENST00000605023 201 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC12P31275 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXC12P31275 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 MIR6852-201ENST00000621699 66 ntBASIC3.14□□□□□ -1.91
HOXC12P31275 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC12P31275 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC12P31275 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC12P31275 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC12P31275 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
HOXC12P31275 RNU6-682P-201ENST00000363843 106 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 Y_RNA.304-201ENST00000365011 112 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 RNU6-763P-201ENST00000390865 106 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 RNU6-918P-201ENST00000391219 106 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 PCNPP3-201ENST00000393579 471 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 FO393413.1-201ENST00000402892 195 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 U8.19-201ENST00000459095 133 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 AC136628.3-201ENST00000521868 290 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC12P31275 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC12P31275 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC12P31275 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC12P31275 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.13□□□□□ -1.91
HOXC12P31275 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HOXC12P31275 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC12P31275 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC12P31275 RNU6-801P-201ENST00000364087 105 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 RNU6-438P-201ENST00000365561 103 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 SNORA40.19-201ENST00000390846 128 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 OOSP1P1-201ENST00000423265 274 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 NDUFB1P1-201ENST00000435191 180 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 AL161788.1-201ENST00000441805 169 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 UBBP3-201ENST00000445497 241 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC12P31275 HMGB3P3-201ENST00000510526 400 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 RNU6-579P-201ENST00000516879 102 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 AC018630.3-201ENST00000542637 96 ntBASIC3.12□□□□□ -1.91
HOXC12P31275 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC12P31275 Y_RNA.233-201ENST00000364407 101 ntBASIC3.11□□□□□ -1.91
HOXC12P31275 SNORD31B-201ENST00000364977 69 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms