Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORD37.2-201ENST00000391075 66 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 RNU6-498P-201ENST00000459468 107 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 RAC1P2-201ENST00000511164 579 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFAP04085 RNA5SP272-201ENST00000516095 111 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 SCARNA3-201ENST00000517097 143 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 AC027419.1-201ENST00000522976 328 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFAP04085 AC023043.3-201ENST00000593113 385 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFAP04085 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFAP04085 U6.105-201ENST00000637379 88 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
PDGFAP04085 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFAP04085 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFAP04085 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDGFAP04085 AL356292.1-201ENST00000283110 373 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 CD24P4-201ENST00000382840 243 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 RNU6-1168P-201ENST00000390831 104 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 AL139247.1-201ENST00000422768 325 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFAP04085 AC008267.6-201ENST00000441664 139 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFAP04085 RPL23AP54-201ENST00000495129 419 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 SEM1P1-201ENST00000506694 209 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 AC104619.4-201ENST00000510773 249 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFAP04085 RNU2-34P-201ENST00000516534 121 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 SNORA70.24-201ENST00000517233 118 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFAP04085 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFAP04085 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFAP04085 MIR3186-201ENST00000577404 85 ntBASIC3.62□□□□□ -1.83
PDGFAP04085 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PDGFAP04085 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDGFAP04085 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
PDGFAP04085 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFAP04085 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
PDGFAP04085 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFAP04085 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 RPS29P4-201ENST00000414733 161 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AL135786.1-201ENST00000415892 214 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFAP04085 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AC008155.2-201ENST00000464337 397 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFAP04085 AC025647.1-201ENST00000517879 253 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.61□□□□□ -1.83
PDGFAP04085 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.61□□□□□ -1.83
PDGFAP04085 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.61□□□□□ -1.83
PDGFAP04085 AC112693.2-201ENST00000556538 232 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AC105245.1-201ENST00000581934 244 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 MIR3199-1-201ENST00000582434 88 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFAP04085 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFAP04085 AC013412.1-201ENST00000610687 192 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 MIR7515-201ENST00000637837 67 ntBASIC3.61□□□□□ -1.83
PDGFAP04085 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.61□□□□□ -1.83
PDGFAP04085 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDGFAP04085 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 SNORA22C-201ENST00000384614 134 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 MIR218-1-201ENST00000384999 110 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 AL353705.1-201ENST00000433468 480 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 RNU6-437P-201ENST00000459408 95 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 MIR3646-201ENST00000578301 84 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 MIR5739-201ENST00000619803 80 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
PDGFAP04085 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDGFAP04085 AC073346.2-201ENST00000624724 2058 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.59□□□□□ -1.83
PDGFAP04085 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDGFAP04085 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-1290P-201ENST00000362957 109 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU4-13P-201ENST00000364019 141 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNA5SP97-201ENST00000365006 84 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-1240P-201ENST00000365155 104 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-546P-201ENST00000383991 107 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-418P-201ENST00000384035 107 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNVU1-14-201ENST00000384770 164 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.59□□□□□ -1.83
PDGFAP04085 AL133162.1-201ENST00000463228 453 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RPL27AP5-201ENST00000469428 449 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RN7SL293P-201ENST00000481765 281 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-561P-201ENST00000516222 102 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 RNU6-965P-201ENST00000516721 96 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.59□□□□□ -1.83
PDGFAP04085 LARP7P3-201ENST00000579888 337 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 AL365222.1-201ENST00000614661 98 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
PDGFAP04085 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms