Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC093259.1-201ENST00000509755 300 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 AC006349.1-201ENST00000555526 235 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 MIR4472-2-201ENST00000582069 67 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 MIR3936-201ENST00000584304 110 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 AC021613.1-201ENST00000623880 111 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 AL512310.12-203ENST00000640543 90 ntBASIC3.82□□□□□ -1.8
RNF223E7ERA6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF223E7ERA6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RNF223E7ERA6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF223E7ERA6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF223E7ERA6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF223E7ERA6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF223E7ERA6 MFSD8-242ENST00000641690 4199 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 SNORA1.1-201ENST00000364671 133 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF223E7ERA6 SNORD77B-201ENST00000391112 67 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 RNA5SP239-201ENST00000410218 129 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 Y_RNA.609-201ENST00000410669 89 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 AC107083.1-201ENST00000439643 279 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 SCARNA10-201ENST00000459255 330 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 RN7SL98P-201ENST00000462271 300 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 AC106707.2-201ENST00000484182 374 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 MIR4762-201ENST00000585261 75 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 AC034229.5-201ENST00000624258 185 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 MIR1248-201ENST00000629190 106 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 AC073346.2-201ENST00000624724 2058 ntBASIC3.81□□□□□ -1.8
RNF223E7ERA6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
RNF223E7ERA6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RNF223E7ERA6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF223E7ERA6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF223E7ERA6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF223E7ERA6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF223E7ERA6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 RNU6-1084P-201ENST00000362498 107 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 snoU2-30.1-201ENST00000365012 70 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 POLR2J4-204ENST00000418424 324 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 AC060773.1-201ENST00000421698 310 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 AC244505.4-201ENST00000434905 287 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 SSXP5-201ENST00000443473 287 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 RN7SL604P-201ENST00000492589 296 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 RNA5SP112-201ENST00000515937 99 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 RNU6-586P-201ENST00000517265 104 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 AP002004.2-201ENST00000531656 154 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 MIR4429-201ENST00000580105 73 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 MIR4765-201ENST00000585007 77 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 AC103810.7-201ENST00000607821 91 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 U7.4-201ENST00000614961 63 ntBASIC3.8□□□□□ -1.8
RNF223E7ERA6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF223E7ERA6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF223E7ERA6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 AC008264.2-201ENST00000610193 3731 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 SNORA1B-201ENST00000362535 133 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 SNORD68-201ENST00000363214 84 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 AC073073.1-201ENST00000493920 463 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 AC002076.2-201ENST00000617362 122 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 RNA5SP196-201ENST00000625967 102 ntBASIC3.79□□□□□ -1.8
RNF223E7ERA6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF223E7ERA6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF223E7ERA6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF223E7ERA6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF223E7ERA6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF223E7ERA6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
RNF223E7ERA6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
RNF223E7ERA6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF223E7ERA6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RNF223E7ERA6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF223E7ERA6 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
RNF223E7ERA6 snoU2-30.2-201ENST00000362805 70 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms