Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 U6.104-201ENST00000637979 90 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 AP006437.1-201ENST00000641440 3685 ntBASIC2.86□□□□□ -1.95
PCDHGA9Q9Y5G4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-770P-201ENST00000363929 105 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-926P-201ENST00000384075 107 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AC022018.1-201ENST00000430685 241 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AL731563.1-201ENST00000442202 214 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-625P-201ENST00000459412 107 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AC010655.3-201ENST00000478818 450 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-635P-201ENST00000516651 102 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-897P-201ENST00000517135 105 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 AC130454.1-201ENST00000622948 401 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 LINC02555-201ENST00000563933 1951 ntBASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDHGA9Q9Y5G4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR22-201ENST00000362190 85 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR410-201ENST00000362222 80 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1309P-201ENST00000363305 108 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-727P-201ENST00000363592 107 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 SNORA25B-201ENST00000365507 128 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-713P-201ENST00000384761 107 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP475-201ENST00000410568 110 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 UQCRHP3-201ENST00000451503 251 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-408P-201ENST00000515910 100 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR449C-201ENST00000516047 92 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU6-965P-201ENST00000516721 96 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNU1-117P-201ENST00000517041 158 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RNA5SP490-201ENST00000517141 136 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 MIR3684-201ENST00000579779 74 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 RAC1P9-201ENST00000604990 392 ntBASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHGA9Q9Y5G4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PCDHGA9Q9Y5G4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.84□□□□□ -1.96
PCDHGA9Q9Y5G4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 SNORA51.4-201ENST00000364993 124 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-301P-201ENST00000384277 107 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 SNORA67.2-201ENST00000384300 149 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 Y_RNA.574-201ENST00000384766 95 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 AL079342.1-201ENST00000401460 267 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 AC004866.1-201ENST00000411748 78 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 TOMM22P2-201ENST00000430735 237 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 HMGN2P18-201ENST00000450680 270 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 MTCO2P24-201ENST00000515611 426 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNY3P15-201ENST00000516297 97 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU2-34P-201ENST00000516534 121 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 AC107016.2-201ENST00000547968 190 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 AK6P2-201ENST00000549020 471 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 GTF3AP2-201ENST00000557014 266 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 MIR1248-201ENST00000629190 106 ntBASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA9Q9Y5G4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-626P-201ENST00000363354 107 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 RPL21P1-201ENST00000399532 476 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC245102.2-201ENST00000448956 180 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC016925.1-201ENST00000458303 298 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC117440.1-201ENST00000474107 571 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 RPL26P26-201ENST00000480251 434 ntBASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA9Q9Y5G4 RNU6-397P-201ENST00000516226 104 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms