Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZSWIM2Q8NEG5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-545P-201ENST00000362681 104 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-743P-201ENST00000364151 106 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 Y_RNA.581-201ENST00000391017 97 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AL390729.2-201ENST00000416137 156 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AC003685.2-201ENST00000422795 395 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AC092427.1-202ENST00000430569 476 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 SEPT14P8-201ENST00000508026 178 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AL109918.3-201ENST00000603072 338 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 SNORD113-5-201ENST00000607261 78 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
ZSWIM2Q8NEG5 RNU4-90P-201ENST00000362773 141 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 SNORA67.2-201ENST00000384300 149 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-102P-201ENST00000384485 104 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 ATP5EP1-201ENST00000510257 156 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 AC107222.1-201ENST00000510899 637 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-496P-201ENST00000516145 99 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RN7SKP282-201ENST00000516824 299 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 AC055872.1-201ENST00000570978 278 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 AC004467.1-201ENST00000615678 330 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
ZSWIM2Q8NEG5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 AC010615.1-201ENST00000594254 1764 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 U3.8-201ENST00000363675 217 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 Y_RNA.331-201ENST00000365267 102 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 RNU6-438P-201ENST00000365561 103 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 MIR300-201ENST00000401138 83 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 MIR1283-1-201ENST00000408494 87 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 AC110588.1-201ENST00000559699 137 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 AC006001.4-201ENST00000622243 395 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 AC091932.3-201ENST00000624223 323 ntBASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
ZSWIM2Q8NEG5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
ZSWIM2Q8NEG5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 SNORD81.1-201ENST00000363064 77 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 Y_RNA.188-201ENST00000363952 111 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 Y_RNA.541-201ENST00000384640 113 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 MIR561-201ENST00000385216 97 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RNU2-38P-201ENST00000410856 79 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RPL23AP36-201ENST00000413895 458 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 AL135938.1-201ENST00000443141 297 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 SNORD127-201ENST00000458892 86 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RNU6-1132P-201ENST00000459214 107 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 HMGN2P9-201ENST00000476875 229 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 RNA5SP490-201ENST00000517141 136 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 DEFB108E-201ENST00000524692 240 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 AL449363.1-201ENST00000617815 186 ntBASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
ZSWIM2Q8NEG5 Y_RNA.286-201ENST00000364813 102 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 Y_RNA.307-201ENST00000365022 117 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 RNU6-290P-201ENST00000365212 101 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 MIR483-201ENST00000385070 76 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 AL357139.1-201ENST00000407792 426 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 AC022018.1-201ENST00000430685 241 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 TOMM22P2-201ENST00000430735 237 ntBASIC3.14□□□□□ -1.91
ZSWIM2Q8NEG5 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms