Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC092268.1-201ENST00000342691 405 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-1266P-201ENST00000362794 105 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.117-201ENST00000363294 101 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 Y_RNA.277-201ENST00000364754 102 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 MIR10B-201ENST00000385011 110 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RNA5SP213-201ENST00000391031 106 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AL603908.1-201ENST00000406098 201 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AC078809.1-201ENST00000427601 140 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 UQCRHP3-201ENST00000451503 251 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RPL30P12-201ENST00000474666 353 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RN7SKP132-201ENST00000516001 208 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AC245166.1-201ENST00000521012 253 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AC021231.3-201ENST00000558497 370 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 UBL5P4-201ENST00000562584 236 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 AC009779.6-201ENST00000603972 165 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 BX284668.6-201ENST00000606899 438 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTDP1Q9Y5B0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AL035425.3-201ENST00000564206 4996 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-137P-201ENST00000363680 108 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 SNORD63-201ENST00000384262 68 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-102P-201ENST00000384485 104 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 MIR487A-201ENST00000385009 80 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-159P-201ENST00000391080 106 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNA5SP390-201ENST00000410191 113 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AC063976.3-201ENST00000426849 329 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AL445305.1-201ENST00000432577 575 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AL161651.1-201ENST00000440882 223 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 snoU13.6-201ENST00000458785 104 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-496P-201ENST00000516145 99 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RN7SKP49-201ENST00000516675 260 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-182P-201ENST00000516970 105 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU6-58P-201ENST00000517143 103 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AC090897.2-201ENST00000581715 130 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 AC004944.1-201ENST00000517807 3059 ntBASIC3.28□□□□□ -1.88
CTDP1Q9Y5B0 RNU4-90P-201ENST00000362773 141 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-290P-201ENST00000365212 101 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-487P-201ENST00000365430 104 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-281P-201ENST00000384212 103 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 AL033519.2-201ENST00000403958 392 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-1001P-201ENST00000411265 100 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 AC005002.2-201ENST00000438228 269 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 SUMO1P2-201ENST00000452524 304 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU4-71P-201ENST00000516258 113 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 AC079600.2-201ENST00000550076 130 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 AC098479.1-201ENST00000609225 154 ntBASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDP1Q9Y5B0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.462-201ENST00000384268 102 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-622P-201ENST00000384272 103 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 RNU2-14P-201ENST00000411053 191 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 HSPE1P25-201ENST00000455484 251 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 SNORD109B-201ENST00000458961 67 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 SNORD109A-201ENST00000459128 67 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 GZMAP1-201ENST00000503054 631 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 SEPT14P8-201ENST00000508026 178 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 AC130289.1-201ENST00000577321 73 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
CTDP1Q9Y5B0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 RNU6-280P-201ENST00000364145 104 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.785-201ENST00000384290 109 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 MIR512-1-201ENST00000384913 84 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 SNORA53-201ENST00000391141 249 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 SNORD58.1-201ENST00000391313 66 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 RPL21P3-201ENST00000395517 478 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 RNU5A-5P-201ENST00000411054 116 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 PIGPP3-201ENST00000425307 415 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 SUMO1P3-201ENST00000439961 304 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 AC107626.1-201ENST00000471084 183 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 SERF1AP1-201ENST00000514575 187 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 Y_RNA.700-201ENST00000516806 100 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 RNU7-110P-201ENST00000516891 62 ntBASIC3.25□□□□□ -1.89
CTDP1Q9Y5B0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms