Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 CKS1BP2-201ENST00000497342 240 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 RNU6-496P-201ENST00000516145 99 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 RNU6-107P-201ENST00000516643 102 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 DEFB108E-201ENST00000524692 240 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 MIR4423-201ENST00000580922 80 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AC105245.1-201ENST00000581934 244 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 MIR5739-201ENST00000619803 80 ntBASIC3.63□□□□□ -1.83
DDX41Q9UJV9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DDX41Q9UJV9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 RNU6-379P-201ENST00000363813 104 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 SNORD32B-201ENST00000364460 84 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 SNORA20.1-201ENST00000364790 130 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 RNA5SP475-201ENST00000410568 110 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 RNA5SP344-201ENST00000411081 104 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 RNA5SP217-201ENST00000515959 91 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 AC010620.2-201ENST00000600135 313 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 AP001282.2-201ENST00000616149 309 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 AC006001.4-201ENST00000622243 395 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 AC068205.3-201ENST00000636385 468 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.62□□□□□ -1.83
DDX41Q9UJV9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.62□□□□□ -1.83
DDX41Q9UJV9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.237-201ENST00000364439 102 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 RNU6-1175P-201ENST00000365200 107 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 RNU6-290P-201ENST00000365212 101 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 SNORA7.4-201ENST00000384249 137 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.552-201ENST00000384665 112 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.562-201ENST00000384695 113 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 MIR1289-1-201ENST00000408836 144 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AC139712.2-201ENST00000424302 339 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AC107222.1-201ENST00000510899 637 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 RNU6-1338P-201ENST00000516328 91 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 MIR6852-201ENST00000621699 66 ntBASIC3.61□□□□□ -1.83
DDX41Q9UJV9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
DDX41Q9UJV9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX41Q9UJV9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX41Q9UJV9 RNU4-30P-201ENST00000410245 143 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 RAB28P5-201ENST00000427490 651 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 MTND4LP30-201ENST00000454092 297 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 CYP2C59P-201ENST00000457790 269 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 AC080013.2-201ENST00000460866 323 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 AC083906.5-201ENST00000503722 328 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 AC023141.11-201ENST00000508864 202 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 EIF4BP1-201ENST00000554881 351 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 MIR3128-201ENST00000581957 66 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 UBL5P2-201ENST00000583788 219 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX41Q9UJV9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.6□□□□□ -1.83
DDX41Q9UJV9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX41Q9UJV9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX41Q9UJV9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 Y_RNA.541-201ENST00000384640 113 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 SNORA46-201ENST00000384762 135 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 RN7SKP58-201ENST00000411010 305 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AC008885.1-201ENST00000514930 301 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 RNU6-1023P-201ENST00000516137 106 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 RNU1-117P-201ENST00000517041 158 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 DEFB131C-201ENST00000528817 165 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AC005357.1-201ENST00000588399 301 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AC012433.1-201ENST00000588916 398 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AL713866.2-201ENST00000603579 219 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 MIR3674-201ENST00000636576 68 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX41Q9UJV9 AC080128.1-201ENST00000474389 1917 ntBASIC3.59□□□□□ -1.83
DDX41Q9UJV9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX41Q9UJV9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX41Q9UJV9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.58□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.477-201ENST00000384352 108 ntBASIC3.58□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.58□□□□□ -1.84
DDX41Q9UJV9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.58□□□□□ -1.84
DDX41Q9UJV9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX41Q9UJV9 ELOCP21-201ENST00000412558 336 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 456.6 ms