Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 Y_RNA.569-201ENST00000384749 103 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 MIR512-1-201ENST00000384913 84 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNORA53-201ENST00000391141 249 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LITAFQ99732 RNA5SP475-201ENST00000410568 110 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RPL19P1-201ENST00000411635 428 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.95□□□□□ -2.1
LITAFQ99732 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RN7SL601P-201ENST00000471221 293 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AC104619.4-201ENST00000510773 249 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNORA9.3-201ENST00000516383 129 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-966P-201ENST00000516479 104 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-107P-201ENST00000516643 102 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-1098P-201ENST00000516772 96 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU2-31P-201ENST00000516954 155 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-111P-201ENST00000517179 105 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-586P-201ENST00000517265 104 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.95□□□□□ -2.1
LITAFQ99732 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.95□□□□□ -2.1
LITAFQ99732 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.95□□□□□ -2.1
LITAFQ99732 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC1.95□□□□□ -2.1
LITAFQ99732 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AL590240.4-201ENST00000616908 390 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AC006001.4-201ENST00000622243 395 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 IGHVIII-44-202ENST00000636235 289 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 MIR3674-201ENST00000636576 68 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LITAFQ99732 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.95□□□□□ -2.1
LITAFQ99732 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.94□□□□□ -2.1
LITAFQ99732 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LITAFQ99732 Y_RNA.54-201ENST00000362766 105 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 RNU6-1266P-201ENST00000362794 105 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 Y_RNA.277-201ENST00000364754 102 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LITAFQ99732 RNU6-1264P-201ENST00000383891 107 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AL139095.1-201ENST00000404326 391 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 RNU6-1199P-201ENST00000411249 104 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.94□□□□□ -2.1
LITAFQ99732 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.94□□□□□ -2.1
LITAFQ99732 GOT2P5-201ENST00000433995 546 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 RPL23AP58-201ENST00000440453 469 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 AC005042.3-201ENST00000453230 174 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC080013.2-201ENST00000460866 323 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC083906.5-201ENST00000503722 328 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 MIR449C-201ENST00000516047 92 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 RNU5F-4P-201ENST00000516581 114 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.94□□□□□ -2.1
LITAFQ99732 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 MIR3605-201ENST00000583214 100 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 AL109918.3-201ENST00000603072 338 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 U2.14-201ENST00000615943 113 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC091953.5-201ENST00000622919 233 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 AC010297.1-201ENST00000623948 149 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 MIR622-201ENST00000638396 96 ntBASIC1.94□□□□□ -2.1
LITAFQ99732 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.94□□□□□ -2.1
LITAFQ99732 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
LITAFQ99732 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.94□□□□□ -2.1
LITAFQ99732 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LITAFQ99732 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.94□□□□□ -2.1
LITAFQ99732 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LITAFQ99732 RNU6-454P-201ENST00000364292 107 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 Y_RNA.383-201ENST00000383855 97 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 SNORD58.1-201ENST00000391313 66 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 RNU2-54P-201ENST00000410299 190 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC104332.2-201ENST00000429959 156 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 POLR2KP2-201ENST00000438155 177 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.93□□□□□ -2.1
LITAFQ99732 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC231760.1-201ENST00000498002 260 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC023141.11-201ENST00000508864 202 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
LITAFQ99732 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.93□□□□□ -2.1
LITAFQ99732 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.93□□□□□ -2.1
LITAFQ99732 AC018630.3-201ENST00000542637 96 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC008873.1-201ENST00000625051 138 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 AC009093.8-201ENST00000641769 292 ntBASIC1.93□□□□□ -2.1
LITAFQ99732 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC1.93□□□□□ -2.1
LITAFQ99732 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.93□□□□□ -2.1
LITAFQ99732 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
LITAFQ99732 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LITAFQ99732 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.93□□□□□ -2.1
LITAFQ99732 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
LITAFQ99732 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LITAFQ99732 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LITAFQ99732 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LITAFQ99732 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.92□□□□□ -2.1
LITAFQ99732 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms