Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
LRCH3Q96II8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRCH3Q96II8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 AC026241.1-201ENST00000517873 2142 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.55□□□□□ -1.68
LRCH3Q96II8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 RPS4XP11-201ENST00000446897 772 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 RNU6-1098P-201ENST00000516772 96 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.55□□□□□ -1.68
LRCH3Q96II8 AC015912.2-201ENST00000571053 181 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 HMGN2P15-201ENST00000585707 270 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 AC007229.1-201ENST00000590455 412 ntBASIC4.55□□□□□ -1.68
LRCH3Q96II8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LRCH3Q96II8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
LRCH3Q96II8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LRCH3Q96II8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.55□□□□□ -1.68
LRCH3Q96II8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRCH3Q96II8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRCH3Q96II8 RNU6-655P-201ENST00000362858 107 ntBASIC4.54□□□□□ -1.68
LRCH3Q96II8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.54□□□□□ -1.68
LRCH3Q96II8 RNU6-221P-201ENST00000459541 99 ntBASIC4.54□□□□□ -1.68
LRCH3Q96II8 RNU6-1270P-201ENST00000517128 108 ntBASIC4.54□□□□□ -1.68
LRCH3Q96II8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LRCH3Q96II8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRCH3Q96II8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRCH3Q96II8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LRCH3Q96II8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.54□□□□□ -1.68
LRCH3Q96II8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LRCH3Q96II8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.54□□□□□ -1.68
LRCH3Q96II8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRCH3Q96II8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.53□□□□□ -1.68
LRCH3Q96II8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRCH3Q96II8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.53□□□□□ -1.68
LRCH3Q96II8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRCH3Q96II8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRCH3Q96II8 RNA5SP175-201ENST00000364275 119 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 SNORD61-201ENST00000384252 73 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 MIR759-201ENST00000390224 91 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 MIR1283-1-201ENST00000408494 87 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC063976.3-201ENST00000426849 329 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 RNA5SP57-201ENST00000459463 123 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 RN7SL812P-201ENST00000493791 279 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC005921.1-201ENST00000510589 286 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC091826.1-201ENST00000514065 313 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 SCARNA23-201ENST00000516060 130 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 RNU5F-4P-201ENST00000516581 114 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC011602.1-201ENST00000546484 331 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.53□□□□□ -1.68
LRCH3Q96II8 AC012493.2-201ENST00000595083 291 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 U6.73-201ENST00000619194 103 ntBASIC4.53□□□□□ -1.68
LRCH3Q96II8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRCH3Q96II8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LRCH3Q96II8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 MAPK10-303ENST00000641324 3959 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 RNY3P2-201ENST00000362918 102 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 RNU6-486P-201ENST00000363116 107 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 SNORA7.2-201ENST00000364446 145 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 Z74021.1-201ENST00000423610 407 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 HMGN2P21-201ENST00000447764 270 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 RPS26P48-201ENST00000491713 339 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 DEFB131E-201ENST00000532329 154 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 AC022254.1-201ENST00000567857 235 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
LRCH3Q96II8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 AC000123.3-201ENST00000624029 4975 ntBASIC4.52□□□□□ -1.69
LRCH3Q96II8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRCH3Q96II8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRCH3Q96II8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LRCH3Q96II8 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 RNU6-57P-201ENST00000411348 103 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 HSPE1P12-201ENST00000412576 301 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 CYCSP35-201ENST00000451978 304 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 AC139453.2-201ENST00000487255 133 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 AC104619.4-201ENST00000510773 249 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 RNU6-857P-201ENST00000515893 110 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 RNA5SP73-201ENST00000516744 108 ntBASIC4.51□□□□□ -1.69
LRCH3Q96II8 AC073308.1-201ENST00000623696 305 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms