Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AP000553.6-201ENST00000641242 118 ntBASIC6.2□□□□□ -1.42
TRIM41Q8WV44 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM41Q8WV44 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM41Q8WV44 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM41Q8WV44 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM41Q8WV44 AC018555.1-201ENST00000567548 1980 ntBASIC6.2□□□□□ -1.42
TRIM41Q8WV44 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM41Q8WV44 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM41Q8WV44 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM41Q8WV44 MIR422A-201ENST00000362286 90 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 SNORD87-201ENST00000364849 89 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 RNU6-588P-201ENST00000410281 105 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 RNU6-710P-201ENST00000410424 105 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 CYCSP4-201ENST00000429682 331 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 NDUFB1P1-201ENST00000435191 180 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 RPS29P20-201ENST00000489592 171 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM41Q8WV44 MIR5680-201ENST00000577577 84 ntBASIC6.19□□□□□ -1.42
TRIM41Q8WV44 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM41Q8WV44 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM41Q8WV44 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 SNORD9-201ENST00000362566 104 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 SNORA44-201ENST00000384584 132 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 RNU6-768P-201ENST00000384683 107 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 NDUFB4P6-201ENST00000436819 366 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 RPS27AP10-201ENST00000496103 208 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 RNU1-117P-201ENST00000517041 158 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 AC090049.2-201ENST00000550377 109 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 MIR3613-201ENST00000579844 87 ntBASIC6.18□□□□□ -1.42
TRIM41Q8WV44 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM41Q8WV44 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 Y_RNA.164-201ENST00000363709 102 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 SNORD115-30-201ENST00000364117 82 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 Y_RNA.341-201ENST00000365341 102 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 RNU6-1144P-201ENST00000384247 104 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AL606845.1-201ENST00000404881 255 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AL355497.1-201ENST00000406262 551 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 RNA5SP390-201ENST00000410191 113 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 NDUFS5P4-201ENST00000412983 318 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 Y_RNA.709-201ENST00000516952 92 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AC115990.1-201ENST00000526957 301 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 AC024614.2-201ENST00000577584 372 ntBASIC6.17□□□□□ -1.42
TRIM41Q8WV44 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM41Q8WV44 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TRIM41Q8WV44 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM41Q8WV44 RNU5E-3P-201ENST00000515913 68 ntBASIC6.16□□□□□ -1.42
TRIM41Q8WV44 RNU6-561P-201ENST00000516222 102 ntBASIC6.16□□□□□ -1.42
TRIM41Q8WV44 CYCSP26-201ENST00000534107 320 ntBASIC6.16□□□□□ -1.42
TRIM41Q8WV44 AL391903.3-201ENST00000612158 163 ntBASIC6.16□□□□□ -1.42
TRIM41Q8WV44 AP001340.1-201ENST00000624405 217 ntBASIC6.16□□□□□ -1.42
TRIM41Q8WV44 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM41Q8WV44 MTND5P32-201ENST00000560711 1802 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 AC073073.2-201ENST00000609827 2578 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM41Q8WV44 RNU6-915P-201ENST00000364943 103 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 CYCSP49-201ENST00000420810 319 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM41Q8WV44 snoU13.26-201ENST00000459452 105 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 FCF1P8-201ENST00000510322 597 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 SNORA70.18-201ENST00000516696 98 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 MIR3646-201ENST00000578301 84 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 AC006254.2-201ENST00000603259 279 ntBASIC6.15□□□□□ -1.42
TRIM41Q8WV44 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM41Q8WV44 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM41Q8WV44 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM41Q8WV44 AL136360.1-201ENST00000503377 1900 ntBASIC6.15□□□□□ -1.43
TRIM41Q8WV44 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM41Q8WV44 MIR367-201ENST00000362299 68 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 RNU6-728P-201ENST00000365375 104 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 CBX3P9-201ENST00000402326 552 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
TRIM41Q8WV44 RPS27P1-201ENST00000450552 247 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 ACA59.2-201ENST00000517061 156 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 MIR3923-201ENST00000579521 83 ntBASIC6.14□□□□□ -1.43
TRIM41Q8WV44 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM41Q8WV44 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 RNU6-235P-201ENST00000362644 107 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 Y_RNA.226-201ENST00000364337 114 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 Y_RNA.229-201ENST00000364347 113 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 MIR526A2-201ENST00000390198 65 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 RNA5SP508-201ENST00000411327 119 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 RNU7-141P-201ENST00000459304 62 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 AIG1P1-201ENST00000503376 148 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms