Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 BX276092.8-201ENST00000455722 250 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 RPL23AP63-201ENST00000498752 471 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 RNA5SP360-201ENST00000516555 118 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 MIR3944-201ENST00000581277 108 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 MIR4762-201ENST00000585261 75 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 AL513534.2-201ENST00000603836 250 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 AC096720.1-201ENST00000604441 183 ntBASIC4.92□□□□□ -1.62
NUBP1P53384 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUBP1P53384 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUBP1P53384 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUBP1P53384 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
NUBP1P53384 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 SNORA1B-201ENST00000362535 133 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 SNORA2.3-201ENST00000383920 135 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 MIR589-201ENST00000385238 99 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 SNORA7.5-201ENST00000410672 110 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 RPL32P35-201ENST00000415214 394 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 RPL23AP83-201ENST00000434984 473 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 CYCSP29-201ENST00000533731 318 ntBASIC4.91□□□□□ -1.62
NUBP1P53384 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.91□□□□□ -1.62
NUBP1P53384 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NUBP1P53384 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NUBP1P53384 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.91□□□□□ -1.62
NUBP1P53384 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUBP1P53384 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
NUBP1P53384 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUBP1P53384 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NUBP1P53384 SNORD116-10-201ENST00000363791 102 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 RNA5SP467-201ENST00000391274 118 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 Y_RNA.611-201ENST00000410682 108 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 AL512326.2-201ENST00000426359 151 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 BX323845.1-201ENST00000432417 179 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 SNRPGP14-201ENST00000435400 219 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 AL161788.1-201ENST00000441805 169 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 RN7SL441P-201ENST00000492388 296 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 PHBP14-201ENST00000512887 367 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 MRPL49P2-201ENST00000521066 465 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 RNA5SP196-201ENST00000625967 102 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.9□□□□□ -1.63
NUBP1P53384 AC091304.10-201ENST00000641554 121 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUBP1P53384 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
NUBP1P53384 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUBP1P53384 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NUBP1P53384 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
NUBP1P53384 AL133243.3-201ENST00000617415 3004 ntBASIC4.9□□□□□ -1.63
NUBP1P53384 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NUBP1P53384 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NUBP1P53384 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUBP1P53384 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
NUBP1P53384 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUBP1P53384 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.89□□□□□ -1.63
NUBP1P53384 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.89□□□□□ -1.63
NUBP1P53384 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NUBP1P53384 SNORA62.3-201ENST00000365110 153 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 RNU6-652P-201ENST00000365488 107 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 RNA5SP323-201ENST00000391094 133 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 RNA5SP239-201ENST00000410218 129 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 RNU2-37P-201ENST00000410695 177 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.89□□□□□ -1.63
NUBP1P53384 AL357552.1-201ENST00000445254 415 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 PHBP16-201ENST00000446318 950 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 ZFRP1-201ENST00000457579 2970 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.89□□□□□ -1.63
NUBP1P53384 RNU1-6P-201ENST00000516290 144 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 AC008739.3-201ENST00000603262 127 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 AC019206.1-201ENST00000621938 425 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 MIR492-201ENST00000638676 116 ntBASIC4.89□□□□□ -1.63
NUBP1P53384 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NUBP1P53384 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUBP1P53384 AC112198.2-201ENST00000426589 6996 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 AP000542.2-201ENST00000623199 6179 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
NUBP1P53384 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
NUBP1P53384 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 U8.5-201ENST00000364528 136 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 MIR670-201ENST00000390142 98 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 RNU4-69P-201ENST00000410677 143 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 RN7SL810P-201ENST00000493031 276 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 SNORD45.4-201ENST00000516629 73 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NUBP1P53384 MIR4439-201ENST00000583746 80 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 AC022726.1-201ENST00000587475 207 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 AC114781.5-201ENST00000615297 108 ntBASIC4.88□□□□□ -1.63
NUBP1P53384 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NUBP1P53384 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.88□□□□□ -1.63
NUBP1P53384 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.88□□□□□ -1.63
NUBP1P53384 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUBP1P53384 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms