Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
TNFSF4P23510 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
TNFSF4P23510 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
TNFSF4P23510 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.55□□□□□ -2
TNFSF4P23510 RPL39P40-201ENST00000445481 146 ntBASIC2.55□□□□□ -2
TNFSF4P23510 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
TNFSF4P23510 U8.22-201ENST00000459141 133 ntBASIC2.55□□□□□ -2
TNFSF4P23510 RNU7-169P-201ENST00000459456 61 ntBASIC2.55□□□□□ -2
TNFSF4P23510 Y_RNA.631-201ENST00000459607 101 ntBASIC2.55□□□□□ -2
TNFSF4P23510 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
TNFSF4P23510 RN7SKP49-201ENST00000516675 260 ntBASIC2.55□□□□□ -2
TNFSF4P23510 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.55□□□□□ -2
TNFSF4P23510 VN1R91P-201ENST00000594377 169 ntBASIC2.55□□□□□ -2
TNFSF4P23510 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
TNFSF4P23510 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
TNFSF4P23510 AC138305.3-201ENST00000624988 240 ntBASIC2.55□□□□□ -2
TNFSF4P23510 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
TNFSF4P23510 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
TNFSF4P23510 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TNFSF4P23510 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
TNFSF4P23510 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFSF4P23510 MTND5P35-201ENST00000557537 1720 ntBASIC2.54□□□□□ -2
TNFSF4P23510 SNORA67.2-201ENST00000384300 149 ntBASIC2.54□□□□□ -2
TNFSF4P23510 MIR329-1-201ENST00000385028 80 ntBASIC2.54□□□□□ -2
TNFSF4P23510 Y_RNA.595-201ENST00000410403 105 ntBASIC2.54□□□□□ -2
TNFSF4P23510 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.54□□□□□ -2
TNFSF4P23510 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
TNFSF4P23510 SCGB1D5P-201ENST00000515134 247 ntBASIC2.54□□□□□ -2
TNFSF4P23510 RNU2-34P-201ENST00000516534 121 ntBASIC2.54□□□□□ -2
TNFSF4P23510 Y_RNA.701-201ENST00000516812 110 ntBASIC2.54□□□□□ -2
TNFSF4P23510 AL442163.3-201ENST00000554110 156 ntBASIC2.54□□□□□ -2
TNFSF4P23510 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.54□□□□□ -2
TNFSF4P23510 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
TNFSF4P23510 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.54□□□□□ -2
TNFSF4P23510 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
TNFSF4P23510 AC107871.2-201ENST00000612894 502 ntBASIC2.54□□□□□ -2
TNFSF4P23510 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.54□□□□□ -2
TNFSF4P23510 AL078596.1-201ENST00000624856 447 ntBASIC2.54□□□□□ -2
TNFSF4P23510 MIR4272-201ENST00000635924 64 ntBASIC2.54□□□□□ -2
TNFSF4P23510 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.54□□□□□ -2
TNFSF4P23510 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TNFSF4P23510 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.53□□□□□ -2
TNFSF4P23510 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.53□□□□□ -2
TNFSF4P23510 AC009487.4-201ENST00000624969 3585 ntBASIC2.53□□□□□ -2
TNFSF4P23510 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
TNFSF4P23510 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
TNFSF4P23510 RNU6-1305P-201ENST00000364353 104 ntBASIC2.53□□□□□ -2
TNFSF4P23510 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
TNFSF4P23510 Y_RNA.394-201ENST00000383942 103 ntBASIC2.53□□□□□ -2
TNFSF4P23510 RNU6-160P-201ENST00000384591 107 ntBASIC2.53□□□□□ -2
TNFSF4P23510 MTCO3P19-201ENST00000415864 321 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.53□□□□□ -2
TNFSF4P23510 AC010095.1-201ENST00000443543 144 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.53□□□□□ -2
TNFSF4P23510 AC007677.1-201ENST00000445757 515 ntBASIC2.53□□□□□ -2
TNFSF4P23510 NDUFB4P10-201ENST00000452541 359 ntBASIC2.53□□□□□ -2
TNFSF4P23510 HMGN2P9-201ENST00000476875 229 ntBASIC2.53□□□□□ -2
TNFSF4P23510 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
TNFSF4P23510 RNU1-117P-201ENST00000517041 158 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.53□□□□□ -2
TNFSF4P23510 AC087441.2-201ENST00000529141 262 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AP002770.2-201ENST00000543613 532 ntBASIC2.53□□□□□ -2
TNFSF4P23510 MZT1P2-201ENST00000604387 248 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AC093732.2-201ENST00000607950 274 ntBASIC2.53□□□□□ -2
TNFSF4P23510 AL606534.2-204ENST00000635008 178 ntBASIC2.53□□□□□ -2
TNFSF4P23510 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TNFSF4P23510 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNU6-727P-201ENST00000363592 107 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNY3P11-201ENST00000364153 102 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNU6-1145P-201ENST00000384246 107 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNY1P14-201ENST00000384426 108 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNY3P4-201ENST00000384428 101 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TNFSF4P23510 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFSF4P23510 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFSF4P23510 GSTA11P-201ENST00000452866 669 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 AC117440.1-201ENST00000474107 571 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RNU6-475P-201ENST00000516073 104 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 RN7SKP43-201ENST00000516173 320 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFSF4P23510 AC006600.1-201ENST00000572529 153 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 AC006157.1-201ENST00000611750 366 ntBASIC2.52□□□□□ -2.01
TNFSF4P23510 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.52□□□□□ -2.01
TNFSF4P23510 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.52□□□□□ -2.01
TNFSF4P23510 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.51□□□□□ -2.01
TNFSF4P23510 ZNF271P-202ENST00000465539 1970 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 LINC02555-201ENST00000563933 1951 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TNFSF4P23510 RNA5SP361-201ENST00000362686 118 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 U3.8-201ENST00000363675 217 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 RNU6-474P-201ENST00000384243 107 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 SNORA54-201ENST00000384281 123 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 RNU6-318P-201ENST00000384283 103 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 HMGN2P39-201ENST00000398005 273 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 MIR548P-201ENST00000408336 84 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 RNA5SP504-201ENST00000410676 117 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.51□□□□□ -2.01
TNFSF4P23510 AL357134.1-201ENST00000445848 426 ntBASIC2.51□□□□□ -2.01
TNFSF4P23510 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms