Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MTCO3P28-201ENST00000513351 515 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.07□□□□□ -2.24
BRD4O60885 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.07□□□□□ -2.24
BRD4O60885 AP002963.1-201ENST00000530590 184 ntBASIC1.07□□□□□ -2.24
BRD4O60885 MIR4703-201ENST00000577728 79 ntBASIC1.07□□□□□ -2.24
BRD4O60885 MIR3169-201ENST00000578032 83 ntBASIC1.07□□□□□ -2.24
BRD4O60885 MIR3941-201ENST00000582572 103 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC040904.1-201ENST00000590850 223 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC008536.2-201ENST00000607284 349 ntBASIC1.07□□□□□ -2.24
BRD4O60885 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.07□□□□□ -2.24
BRD4O60885 MIR8065-201ENST00000620577 100 ntBASIC1.07□□□□□ -2.24
BRD4O60885 AC099654.5-201ENST00000636479 350 ntBASIC1.07□□□□□ -2.24
BRD4O60885 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
BRD4O60885 RNU6-1285P-201ENST00000363480 105 ntBASIC1.06□□□□□ -2.24
BRD4O60885 RNU4-56P-201ENST00000364700 142 ntBASIC1.06□□□□□ -2.24
BRD4O60885 RNU6-606P-201ENST00000384721 111 ntBASIC1.06□□□□□ -2.24
BRD4O60885 RNU2-29P-201ENST00000410423 189 ntBASIC1.06□□□□□ -2.24
BRD4O60885 DYNLT3P2-201ENST00000442517 295 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC132479.1-201ENST00000449160 144 ntBASIC1.06□□□□□ -2.24
BRD4O60885 SCARNA18-201ENST00000459004 134 ntBASIC1.06□□□□□ -2.24
BRD4O60885 BET1P1-201ENST00000482276 359 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC079382.1-201ENST00000493346 557 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.06□□□□□ -2.24
BRD4O60885 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
BRD4O60885 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.06□□□□□ -2.24
BRD4O60885 AC036111.3-201ENST00000526389 112 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AL391840.1-201ENST00000571144 367 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC005786.1-201ENST00000588553 154 ntBASIC1.06□□□□□ -2.24
BRD4O60885 RSL24D1P11-201ENST00000591045 491 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC068790.2-201ENST00000602601 557 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AP000654.2-201ENST00000605633 586 ntBASIC1.06□□□□□ -2.24
BRD4O60885 MIR8087-201ENST00000612745 78 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AC022418.1-201ENST00000624118 445 ntBASIC1.06□□□□□ -2.24
BRD4O60885 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.06□□□□□ -2.24
BRD4O60885 MIR1248-201ENST00000629190 106 ntBASIC1.06□□□□□ -2.24
BRD4O60885 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
BRD4O60885 AC009541.1-201ENST00000438279 2662 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-1120P-201ENST00000362988 108 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-112P-201ENST00000363599 104 ntBASIC1.05□□□□□ -2.24
BRD4O60885 Y_RNA.255-201ENST00000364581 97 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-1303P-201ENST00000364841 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-142P-201ENST00000384019 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-968P-201ENST00000384076 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-1235P-201ENST00000384559 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU2-9P-201ENST00000410194 145 ntBASIC1.05□□□□□ -2.24
BRD4O60885 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.05□□□□□ -2.24
BRD4O60885 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
BRD4O60885 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.05□□□□□ -2.24
BRD4O60885 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-333P-201ENST00000459117 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-498P-201ENST00000459468 107 ntBASIC1.05□□□□□ -2.24
BRD4O60885 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
BRD4O60885 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.05□□□□□ -2.24
BRD4O60885 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.05□□□□□ -2.24
BRD4O60885 AC010493.1-201ENST00000513479 292 ntBASIC1.05□□□□□ -2.24
BRD4O60885 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.05□□□□□ -2.24
BRD4O60885 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.05□□□□□ -2.24
BRD4O60885 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.05□□□□□ -2.24
BRD4O60885 MIR3913-1-201ENST00000577744 102 ntBASIC1.05□□□□□ -2.24
BRD4O60885 MIR4711-201ENST00000578274 70 ntBASIC1.05□□□□□ -2.24
BRD4O60885 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
BRD4O60885 MIR3136-201ENST00000583498 78 ntBASIC1.05□□□□□ -2.24
BRD4O60885 BNIP3P16-201ENST00000589779 534 ntBASIC1.05□□□□□ -2.24
BRD4O60885 AC107304.1-201ENST00000604229 296 ntBASIC1.05□□□□□ -2.24
BRD4O60885 AC018889.1-201ENST00000605372 397 ntBASIC1.05□□□□□ -2.24
BRD4O60885 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
BRD4O60885 RNU6-428P-201ENST00000362942 107 ntBASIC1.04□□□□□ -2.24
BRD4O60885 RNU6-1141P-201ENST00000364520 107 ntBASIC1.04□□□□□ -2.24
BRD4O60885 RNU6-1065P-201ENST00000384513 106 ntBASIC1.04□□□□□ -2.24
BRD4O60885 RNU6-360P-201ENST00000390944 104 ntBASIC1.04□□□□□ -2.24
BRD4O60885 RN7SKP200-201ENST00000410564 320 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC078809.1-201ENST00000427601 140 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC010975.2-201ENST00000427781 588 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC244670.1-201ENST00000436879 112 ntBASIC1.04□□□□□ -2.24
BRD4O60885 UBE2V1P8-201ENST00000437166 265 ntBASIC1.04□□□□□ -2.24
BRD4O60885 C1DP4-201ENST00000455429 424 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.04□□□□□ -2.24
BRD4O60885 RPL26P26-201ENST00000480251 434 ntBASIC1.04□□□□□ -2.24
BRD4O60885 RNU2-69P-201ENST00000516061 100 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC069113.1-201ENST00000517763 267 ntBASIC1.04□□□□□ -2.24
BRD4O60885 SUB1P2-201ENST00000556401 297 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC025449.1-201ENST00000603896 529 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AL356157.2-201ENST00000605122 111 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC109347.2-201ENST00000610220 349 ntBASIC1.04□□□□□ -2.24
BRD4O60885 AC073114.1-201ENST00000612027 490 ntBASIC1.04□□□□□ -2.24
BRD4O60885 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.04□□□□□ -2.24
BRD4O60885 AC078883.4-201ENST00000623218 367 ntBASIC1.04□□□□□ -2.24
BRD4O60885 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.04□□□□□ -2.24
BRD4O60885 SNORD98-201ENST00000636377 67 ntBASIC1.04□□□□□ -2.24
BRD4O60885 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
BRD4O60885 RNU4-15P-201ENST00000362613 141 ntBASIC1.03□□□□□ -2.24
BRD4O60885 RNU6-26P-201ENST00000383985 107 ntBASIC1.03□□□□□ -2.24
BRD4O60885 RNU6-43P-201ENST00000384302 107 ntBASIC1.03□□□□□ -2.24
BRD4O60885 RNU6-692P-201ENST00000384496 107 ntBASIC1.03□□□□□ -2.24
BRD4O60885 RNU6-1127P-201ENST00000384580 107 ntBASIC1.03□□□□□ -2.24
BRD4O60885 AL357139.1-201ENST00000407792 426 ntBASIC1.03□□□□□ -2.24
BRD4O60885 RN7SKP142-201ENST00000411236 328 ntBASIC1.03□□□□□ -2.24
BRD4O60885 MTATP6P18-201ENST00000417994 673 ntBASIC1.03□□□□□ -2.24
BRD4O60885 AL590135.1-201ENST00000422215 156 ntBASIC1.03□□□□□ -2.24
BRD4O60885 AC019205.3-201ENST00000424573 156 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms