Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
MSH5O43196 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
MSH5O43196 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 STX3-208ENST00000641815 3236 ntBASIC6.95□□□□□ -1.3
MSH5O43196 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 RNU1-32P-201ENST00000363937 159 ntBASIC6.95□□□□□ -1.3
MSH5O43196 RNU6-342P-201ENST00000384521 104 ntBASIC6.95□□□□□ -1.3
MSH5O43196 IGLV2-34-201ENST00000490007 283 ntBASIC6.95□□□□□ -1.3
MSH5O43196 RNU2-34P-201ENST00000516534 121 ntBASIC6.95□□□□□ -1.3
MSH5O43196 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC6.95□□□□□ -1.3
MSH5O43196 AC090115.4-201ENST00000609970 188 ntBASIC6.95□□□□□ -1.3
MSH5O43196 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
MSH5O43196 BBX-203ENST00000402543 3980 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
MSH5O43196 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MSH5O43196 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.95□□□□□ -1.3
MSH5O43196 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
MSH5O43196 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MSH5O43196 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MSH5O43196 SNORD45.1-201ENST00000363181 77 ntBASIC6.94□□□□□ -1.3
MSH5O43196 SNORD90-201ENST00000391145 111 ntBASIC6.94□□□□□ -1.3
MSH5O43196 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.94□□□□□ -1.3
MSH5O43196 AC112771.1-201ENST00000463581 102 ntBASIC6.94□□□□□ -1.3
MSH5O43196 RN7SL354P-201ENST00000469282 294 ntBASIC6.94□□□□□ -1.3
MSH5O43196 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
MSH5O43196 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC6.94□□□□□ -1.3
MSH5O43196 MIR4764-201ENST00000580680 88 ntBASIC6.94□□□□□ -1.3
MSH5O43196 AC069114.2-201ENST00000604699 304 ntBASIC6.94□□□□□ -1.3
MSH5O43196 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
MSH5O43196 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.94□□□□□ -1.3
MSH5O43196 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.93□□□□□ -1.3
MSH5O43196 SNORD113.1-201ENST00000363280 73 ntBASIC6.93□□□□□ -1.3
MSH5O43196 RNU6-132P-201ENST00000383863 107 ntBASIC6.93□□□□□ -1.3
MSH5O43196 U3.30-201ENST00000391308 210 ntBASIC6.93□□□□□ -1.3
MSH5O43196 HMGN2P34-201ENST00000437647 269 ntBASIC6.93□□□□□ -1.3
MSH5O43196 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.93□□□□□ -1.3
MSH5O43196 RNU7-48P-201ENST00000458875 63 ntBASIC6.93□□□□□ -1.3
MSH5O43196 snoU13.24-201ENST00000458998 104 ntBASIC6.93□□□□□ -1.3
MSH5O43196 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC6.93□□□□□ -1.3
MSH5O43196 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC6.93□□□□□ -1.3
MSH5O43196 HMGB1P22-201ENST00000505315 124 ntBASIC6.93□□□□□ -1.3
MSH5O43196 RNU7-128P-201ENST00000517247 62 ntBASIC6.93□□□□□ -1.3
MSH5O43196 MIR3064-201ENST00000581130 66 ntBASIC6.93□□□□□ -1.3
MSH5O43196 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
MSH5O43196 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MSH5O43196 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MSH5O43196 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.93□□□□□ -1.3
MSH5O43196 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 SNORA25.6-201ENST00000364121 118 ntBASIC6.92□□□□□ -1.3
MSH5O43196 Y_RNA.491-201ENST00000384417 107 ntBASIC6.92□□□□□ -1.3
MSH5O43196 COX6B1P1-201ENST00000415962 213 ntBASIC6.92□□□□□ -1.3
MSH5O43196 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC6.92□□□□□ -1.3
MSH5O43196 AC023790.1-201ENST00000482174 347 ntBASIC6.92□□□□□ -1.3
MSH5O43196 AC006483.1-201ENST00000487308 313 ntBASIC6.92□□□□□ -1.3
MSH5O43196 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.92□□□□□ -1.3
MSH5O43196 MIR4536-1-201ENST00000583537 88 ntBASIC6.92□□□□□ -1.3
MSH5O43196 AC006272.2-201ENST00000594725 163 ntBASIC6.92□□□□□ -1.3
MSH5O43196 MIR6758-201ENST00000620653 63 ntBASIC6.92□□□□□ -1.3
MSH5O43196 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.92□□□□□ -1.3
MSH5O43196 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
MSH5O43196 AL356489.2-201ENST00000566968 3528 ntBASIC6.92□□□□□ -1.3
MSH5O43196 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MSH5O43196 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
MSH5O43196 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.91□□□□□ -1.3
MSH5O43196 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
MSH5O43196 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
MSH5O43196 U8.5-201ENST00000364528 136 ntBASIC6.91□□□□□ -1.3
MSH5O43196 MIR105-1-201ENST00000385222 81 ntBASIC6.91□□□□□ -1.3
MSH5O43196 AC209154.1-201ENST00000582156 337 ntBASIC6.91□□□□□ -1.3
MSH5O43196 AC011447.4-201ENST00000587562 111 ntBASIC6.91□□□□□ -1.3
MSH5O43196 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
MSH5O43196 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
MSH5O43196 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.9□□□□□ -1.3
MSH5O43196 AL136964.1-201ENST00000622038 2990 ntBASIC6.9□□□□□ -1.3
MSH5O43196 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
MSH5O43196 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
MSH5O43196 Y_RNA.371-201ENST00000365591 113 ntBASIC6.9□□□□□ -1.3
MSH5O43196 MIR147B-201ENST00000390185 80 ntBASIC6.9□□□□□ -1.3
MSH5O43196 MIR1271-201ENST00000408537 86 ntBASIC6.9□□□□□ -1.3
MSH5O43196 RNU6-602P-201ENST00000411155 105 ntBASIC6.9□□□□□ -1.3
MSH5O43196 RNA5SP103-201ENST00000459503 118 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms