Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.25□□□□□ -1.73
USP17L3A6NCW0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 AC018555.1-201ENST00000567548 1980 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 RNU6-801P-201ENST00000364087 105 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 AL139281.1-201ENST00000422120 335 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 RPL23AP62-201ENST00000463396 453 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 RN7SKP164-201ENST00000516138 266 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 RNU6-579P-201ENST00000516879 102 ntBASIC4.24□□□□□ -1.73
USP17L3A6NCW0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP17L3A6NCW0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP17L3A6NCW0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP17L3A6NCW0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.23□□□□□ -1.73
USP17L3A6NCW0 RNU4-84P-201ENST00000364200 139 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 SNORA67.2-201ENST00000384300 149 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 SNORA48.5-201ENST00000391143 135 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 SNORA12-201ENST00000391162 147 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 RNU6-381P-201ENST00000391259 108 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 RN7SKP111-201ENST00000410349 271 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 AL135790.2-201ENST00000437701 267 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 PHBP14-201ENST00000512887 367 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 Y_RNA.797-201ENST00000515977 94 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 SNORA70.12-201ENST00000516084 153 ntBASIC4.23□□□□□ -1.73
USP17L3A6NCW0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.23□□□□□ -1.73
USP17L3A6NCW0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.23□□□□□ -1.73
USP17L3A6NCW0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AC006504.1-201ENST00000562493 3666 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 RNU6-103P-201ENST00000363686 107 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 RNU6-275P-201ENST00000364910 107 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 SNORA72.4-201ENST00000384174 132 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 MIR29B2-201ENST00000385055 81 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 SNORA26.5-201ENST00000391215 123 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 RNU6-855P-201ENST00000410395 104 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AC097463.2-201ENST00000421074 142 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 SEPT7P4-201ENST00000437076 306 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AP001486.1-201ENST00000463339 476 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AL049873.1-201ENST00000480540 376 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 MIR5680-201ENST00000577577 84 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 AC008739.2-201ENST00000597006 317 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 U6.115-201ENST00000636045 103 ntBASIC4.22□□□□□ -1.73
USP17L3A6NCW0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
USP17L3A6NCW0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.21□□□□□ -1.74
USP17L3A6NCW0 RNU6-899P-201ENST00000363947 107 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.293-201ENST00000364908 93 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.368-201ENST00000365547 113 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.400-201ENST00000383963 111 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 SNORA8.3-201ENST00000384679 139 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 MIR586-201ENST00000385035 97 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 AL357075.1-201ENST00000404107 726 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 Z98742.2-201ENST00000431564 187 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 AC146507.2-201ENST00000460608 476 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 AC006445.1-201ENST00000491925 405 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 RN7SL504P-201ENST00000494496 287 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.21□□□□□ -1.74
USP17L3A6NCW0 MIR3684-201ENST00000579779 74 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.21□□□□□ -1.74
USP17L3A6NCW0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.21□□□□□ -1.74
USP17L3A6NCW0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 RNU6-1305P-201ENST00000364353 104 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.456-201ENST00000384232 111 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 Y_RNA.488-201ENST00000384403 102 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 AL355497.1-201ENST00000406262 551 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 EBAG9P1-201ENST00000418955 543 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 EIF4EP4-201ENST00000424916 578 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 AC012531.5-201ENST00000611375 151 ntBASIC4.2□□□□□ -1.74
USP17L3A6NCW0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.2□□□□□ -1.74
USP17L3A6NCW0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms