Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RN7SKP295-201ENST00000517264 153 ntBASIC3.8□□□□□ -1.8
ZNF428Q96B54 AC090517.1-201ENST00000569307 266 ntBASIC3.8□□□□□ -1.8
ZNF428Q96B54 AL162730.1-201ENST00000605734 292 ntBASIC3.8□□□□□ -1.8
ZNF428Q96B54 U2.1-201ENST00000618978 145 ntBASIC3.8□□□□□ -1.8
ZNF428Q96B54 MTND5P16-201ENST00000460269 1703 ntBASIC3.8□□□□□ -1.8
ZNF428Q96B54 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
ZNF428Q96B54 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZNF428Q96B54 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.8□□□□□ -1.8
ZNF428Q96B54 SNORA38-201ENST00000363946 132 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 AL357139.1-201ENST00000407792 426 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 EIF1P2-201ENST00000428233 350 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 TOMM22P6-201ENST00000465035 409 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF428Q96B54 AL163540.1-201ENST00000485382 386 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 SCGB1D5P-201ENST00000515134 247 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 HSPE1P18-201ENST00000517602 280 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.79□□□□□ -1.8
ZNF428Q96B54 GTF3AP2-201ENST00000557014 266 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
ZNF428Q96B54 AC092447.9-201ENST00000603395 144 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 AC087588.2-201ENST00000617667 426 ntBASIC3.79□□□□□ -1.8
ZNF428Q96B54 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF428Q96B54 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF428Q96B54 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 RNU6-574P-201ENST00000384265 107 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 Y_RNA.500-201ENST00000384466 111 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 MCFD2P1-201ENST00000417812 300 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AL160004.2-201ENST00000432935 350 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC009238.1-201ENST00000442165 424 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC009237.6-201ENST00000446969 424 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC074290.1-201ENST00000448883 135 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC090515.1-201ENST00000465295 476 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 Y_RNA.713-201ENST00000517013 96 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 RNA5SP380-201ENST00000517190 98 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC079600.2-201ENST00000550076 130 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 AL442163.3-201ENST00000554110 156 ntBASIC3.78□□□□□ -1.8
ZNF428Q96B54 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.78□□□□□ -1.8
ZNF428Q96B54 AC009487.2-201ENST00000420969 6821 ntBASIC3.78□□□□□ -1.81
ZNF428Q96B54 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF428Q96B54 AC008264.2-201ENST00000610193 3731 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF428Q96B54 RNY3P4-201ENST00000384428 101 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 RNU2-32P-201ENST00000411193 191 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 NDUFB4P10-201ENST00000452541 359 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 AP000870.1-201ENST00000472927 406 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 AC093732.2-201ENST00000607950 274 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 MIR1244-1-201ENST00000612829 85 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 AC005296.1-201ENST00000616145 209 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 MIR1244-3-201ENST00000635744 85 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 MIR4272-201ENST00000635924 64 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 MIR1244-2-201ENST00000636449 85 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 MIR1244-4-202ENST00000636813 85 ntBASIC3.77□□□□□ -1.81
ZNF428Q96B54 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
ZNF428Q96B54 AP006437.1-201ENST00000641440 3685 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 Y_RNA.148-201ENST00000363557 117 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 RNU6-234P-201ENST00000365229 104 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 SNORA33.2-201ENST00000365413 134 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 SNORA63.7-201ENST00000365579 123 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 RNY1P14-201ENST00000384426 108 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 MIR10B-201ENST00000385011 110 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 RNA5SP213-201ENST00000391031 106 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 MTND4P19-201ENST00000446659 478 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 AC103975.1-201ENST00000482506 483 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 RN7SKP49-201ENST00000516675 260 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 AC016925.2-201ENST00000605108 242 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 AC090115.4-201ENST00000609970 188 ntBASIC3.76□□□□□ -1.81
ZNF428Q96B54 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
ZNF428Q96B54 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF428Q96B54 ZNF204P-201ENST00000416749 2397 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 Y_RNA.27-201ENST00000362540 103 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 RNU6-281P-201ENST00000384212 103 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 RNU6-793P-201ENST00000384233 104 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 Y_RNA.496-201ENST00000384444 101 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC245102.2-201ENST00000448956 180 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 RNU7-87P-201ENST00000459343 62 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC114982.1-201ENST00000469402 321 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC105758.1-201ENST00000506038 399 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC074133.1-201ENST00000515696 183 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 NDUFA5P6-201ENST00000542110 379 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC010999.1-201ENST00000611856 324 ntBASIC3.75□□□□□ -1.81
ZNF428Q96B54 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF428Q96B54 AC007485.1-201ENST00000616755 206 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms