Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HMGA2P52926 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3□□□□□ -1.93
HMGA2P52926 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGA2P52926 Y_RNA.114-201ENST00000363265 113 ntBASIC3□□□□□ -1.93
HMGA2P52926 RNU6-72P-201ENST00000384285 79 ntBASIC3□□□□□ -1.93
HMGA2P52926 Y_RNA.558-201ENST00000384685 113 ntBASIC3□□□□□ -1.93
HMGA2P52926 MIRLET7F2-201ENST00000385277 83 ntBASIC3□□□□□ -1.93
HMGA2P52926 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3□□□□□ -1.93
HMGA2P52926 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3□□□□□ -1.93
HMGA2P52926 RNU6-1061P-201ENST00000516530 99 ntBASIC3□□□□□ -1.93
HMGA2P52926 RNU2-12P-201ENST00000517216 168 ntBASIC3□□□□□ -1.93
HMGA2P52926 AC120024.3-201ENST00000603167 156 ntBASIC3□□□□□ -1.93
HMGA2P52926 AC010999.1-201ENST00000611856 324 ntBASIC3□□□□□ -1.93
HMGA2P52926 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
HMGA2P52926 AC009093.8-201ENST00000641769 292 ntBASIC3□□□□□ -1.93
HMGA2P52926 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HMGA2P52926 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
HMGA2P52926 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
HMGA2P52926 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGA2P52926 AC010329.5-201ENST00000623497 2174 ntBASIC3□□□□□ -1.93
HMGA2P52926 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
HMGA2P52926 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA2P52926 ZNF720P1-201ENST00000562403 1939 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA2P52926 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA2P52926 RNU6-1249P-201ENST00000363237 111 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 RNU6-137P-201ENST00000363680 108 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 Y_RNA.229-201ENST00000364347 113 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 SNORA70.2-201ENST00000364506 135 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 Y_RNA.293-201ENST00000364908 93 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 SNORD72-201ENST00000390994 80 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA2P52926 AL606845.1-201ENST00000404881 255 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 MLLT10P1-201ENST00000418346 262 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 BPY2DP-201ENST00000422208 265 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 RPL23AP95-201ENST00000426806 265 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA2P52926 snoU13.6-201ENST00000458785 104 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 HSPE1P6-201ENST00000479457 291 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA2P52926 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA2P52926 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.99□□□□□ -1.93
HMGA2P52926 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.99□□□□□ -1.93
HMGA2P52926 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.99□□□□□ -1.93
HMGA2P52926 AC133485.4-201ENST00000561835 220 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 AC138907.4-201ENST00000570107 226 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 U3.45-201ENST00000607547 219 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 AC010733.2-201ENST00000589496 5702 ntBASIC2.99□□□□□ -1.93
HMGA2P52926 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HMGA2P52926 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 SNORA72.4-201ENST00000384174 132 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 RNY1P7-201ENST00000384743 110 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 SNORA75.5-201ENST00000391291 81 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 U6atac.2-201ENST00000408644 118 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 U3.40-201ENST00000408706 208 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 Z85995.1-201ENST00000415547 335 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AC079780.1-201ENST00000428259 207 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 RPS12P18-201ENST00000442381 270 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 RPS27P1-201ENST00000450552 247 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 AP002884.2-201ENST00000471647 395 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AC106707.2-201ENST00000484182 374 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 RNU6-572P-201ENST00000516724 80 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGA2P52926 IGKV2D-19-201ENST00000523346 262 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 MIR5571-201ENST00000577998 113 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AL355812.1-201ENST00000603215 216 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 AL391903.3-201ENST00000612158 163 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 MIR4275-201ENST00000636486 87 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.98□□□□□ -1.93
HMGA2P52926 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
HMGA2P52926 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HMGA2P52926 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGA2P52926 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HMGA2P52926 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGA2P52926 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HMGA2P52926 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGA2P52926 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HMGA2P52926 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HMGA2P52926 RNU4-35P-201ENST00000362588 141 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 Y_RNA.328-201ENST00000365208 113 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 Y_RNA.498-201ENST00000384460 102 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 RNU6-880P-201ENST00000384526 107 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HMGA2P52926 Y_RNA.584-201ENST00000391090 114 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 RN7SKP177-201ENST00000410567 355 ntBASIC2.97□□□□□ -1.93
HMGA2P52926 AC096649.2-201ENST00000416186 393 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms