Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC010099.1-201ENST00000455434 375 ntBASIC3.51□□□□□ -1.85
SYPP08247 snoU13.14-201ENST00000459372 104 ntBASIC3.51□□□□□ -1.85
SYPP08247 SNORA70.18-201ENST00000516696 98 ntBASIC3.51□□□□□ -1.85
SYPP08247 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.51□□□□□ -1.85
SYPP08247 AL008718.3-201ENST00000610217 321 ntBASIC3.51□□□□□ -1.85
SYPP08247 AC108706.1-201ENST00000611053 297 ntBASIC3.51□□□□□ -1.85
SYPP08247 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.51□□□□□ -1.85
SYPP08247 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SYPP08247 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SYPP08247 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SYPP08247 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.5□□□□□ -1.85
SYPP08247 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SYPP08247 Y_RNA.8-201ENST00000362353 102 ntBASIC3.5□□□□□ -1.85
SYPP08247 AL357139.1-201ENST00000407792 426 ntBASIC3.5□□□□□ -1.85
SYPP08247 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
SYPP08247 RNU2-49P-201ENST00000410666 184 ntBASIC3.5□□□□□ -1.85
SYPP08247 AIMP1P2-201ENST00000425294 312 ntBASIC3.5□□□□□ -1.85
SYPP08247 AC017083.1-201ENST00000428093 483 ntBASIC3.5□□□□□ -1.85
SYPP08247 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.5□□□□□ -1.85
SYPP08247 AL049873.1-201ENST00000480540 376 ntBASIC3.5□□□□□ -1.85
SYPP08247 RNU2-12P-201ENST00000517216 168 ntBASIC3.5□□□□□ -1.85
SYPP08247 AP000867.2-201ENST00000532468 320 ntBASIC3.5□□□□□ -1.85
SYPP08247 TGIF1P1-201ENST00000558095 802 ntBASIC3.5□□□□□ -1.85
SYPP08247 MIR4644-201ENST00000579929 84 ntBASIC3.5□□□□□ -1.85
SYPP08247 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.5□□□□□ -1.85
SYPP08247 AL137843.1-201ENST00000605078 385 ntBASIC3.5□□□□□ -1.85
SYPP08247 AC004832.4-201ENST00000608952 331 ntBASIC3.5□□□□□ -1.85
SYPP08247 PCGEM1.1-201ENST00000613431 131 ntBASIC3.5□□□□□ -1.85
SYPP08247 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.5□□□□□ -1.85
SYPP08247 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SYPP08247 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SYPP08247 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SYPP08247 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYPP08247 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYPP08247 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.49□□□□□ -1.85
SYPP08247 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SYPP08247 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SYPP08247 Y_RNA.415-201ENST00000384012 112 ntBASIC3.49□□□□□ -1.85
SYPP08247 RNU6-1248P-201ENST00000391096 64 ntBASIC3.49□□□□□ -1.85
SYPP08247 RNA5SP475-201ENST00000410568 110 ntBASIC3.49□□□□□ -1.85
SYPP08247 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.49□□□□□ -1.85
SYPP08247 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.49□□□□□ -1.85
SYPP08247 RNU7-23P-201ENST00000459465 62 ntBASIC3.49□□□□□ -1.85
SYPP08247 AP001486.1-201ENST00000463339 476 ntBASIC3.49□□□□□ -1.85
SYPP08247 HMGB3P3-201ENST00000510526 400 ntBASIC3.49□□□□□ -1.85
SYPP08247 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.49□□□□□ -1.85
SYPP08247 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.49□□□□□ -1.85
SYPP08247 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.49□□□□□ -1.85
SYPP08247 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.49□□□□□ -1.85
SYPP08247 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYPP08247 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYPP08247 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SYPP08247 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SYPP08247 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYPP08247 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SYPP08247 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
SYPP08247 RNU6-1264P-201ENST00000383891 107 ntBASIC3.48□□□□□ -1.85
SYPP08247 RNU6-198P-201ENST00000384258 104 ntBASIC3.48□□□□□ -1.85
SYPP08247 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
SYPP08247 AC004866.1-201ENST00000411748 78 ntBASIC3.48□□□□□ -1.85
SYPP08247 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.48□□□□□ -1.85
SYPP08247 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
SYPP08247 RPL23AP70-201ENST00000483361 460 ntBASIC3.48□□□□□ -1.85
SYPP08247 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.48□□□□□ -1.85
SYPP08247 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.48□□□□□ -1.85
SYPP08247 MIR4325-201ENST00000583049 90 ntBASIC3.48□□□□□ -1.85
SYPP08247 AC244205.2-202ENST00000635781 342 ntBASIC3.48□□□□□ -1.85
SYPP08247 AC010889.1-201ENST00000566193 2666 ntBASIC3.48□□□□□ -1.85
SYPP08247 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
SYPP08247 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SYPP08247 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYPP08247 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
SYPP08247 RNU4-15P-201ENST00000362613 141 ntBASIC3.47□□□□□ -1.85
SYPP08247 RNU6-454P-201ENST00000364292 107 ntBASIC3.47□□□□□ -1.85
SYPP08247 Y_RNA.329-201ENST00000365209 107 ntBASIC3.47□□□□□ -1.85
SYPP08247 Y_RNA.500-201ENST00000384466 111 ntBASIC3.47□□□□□ -1.85
SYPP08247 Y_RNA.571-201ENST00000384753 98 ntBASIC3.47□□□□□ -1.85
SYPP08247 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SYPP08247 RNU5E-9P-201ENST00000411164 104 ntBASIC3.47□□□□□ -1.85
SYPP08247 BTF3P11-201ENST00000426582 477 ntBASIC3.47□□□□□ -1.85
SYPP08247 SNRPGP3-201ENST00000469405 227 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC140059.1-201ENST00000489238 361 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC093663.1-201ENST00000497190 394 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.47□□□□□ -1.85
SYPP08247 RNU6-436P-201ENST00000516171 114 ntBASIC3.47□□□□□ -1.85
SYPP08247 SUMO2P18-201ENST00000518873 252 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.47□□□□□ -1.85
SYPP08247 EIF4A1P12-201ENST00000551910 141 ntBASIC3.47□□□□□ -1.85
SYPP08247 MIR5680-201ENST00000577577 84 ntBASIC3.47□□□□□ -1.85
SYPP08247 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.47□□□□□ -1.85
SYPP08247 AL133393.1-201ENST00000603277 287 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC006380.1-201ENST00000603598 186 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC110741.2-201ENST00000605278 268 ntBASIC3.47□□□□□ -1.85
SYPP08247 MIR7112-201ENST00000616126 65 ntBASIC3.47□□□□□ -1.85
SYPP08247 AL138880.2-201ENST00000616214 239 ntBASIC3.47□□□□□ -1.85
SYPP08247 U4.6-201ENST00000621618 127 ntBASIC3.47□□□□□ -1.85
SYPP08247 AC018692.3-201ENST00000623929 123 ntBASIC3.47□□□□□ -1.85
SYPP08247 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYPP08247 AC010680.1-201ENST00000590024 3590 ntBASIC3.47□□□□□ -1.85
SYPP08247 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms