Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NPM3O75607 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 RNA5SP502-201ENST00000362694 119 ntBASIC6.05□□□□□ -1.44
NPM3O75607 SNORD38.1-201ENST00000363863 68 ntBASIC6.05□□□□□ -1.44
NPM3O75607 RNA5SP261-201ENST00000410536 106 ntBASIC6.05□□□□□ -1.44
NPM3O75607 snoU13.20-201ENST00000459180 104 ntBASIC6.05□□□□□ -1.44
NPM3O75607 RN7SL443P-201ENST00000464331 290 ntBASIC6.05□□□□□ -1.44
NPM3O75607 IGLV2-34-201ENST00000490007 283 ntBASIC6.05□□□□□ -1.44
NPM3O75607 SCARNA17.1-201ENST00000516211 143 ntBASIC6.05□□□□□ -1.44
NPM3O75607 SCARNA17.2-201ENST00000516334 143 ntBASIC6.05□□□□□ -1.44
NPM3O75607 SCARNA11.3-201ENST00000517276 130 ntBASIC6.05□□□□□ -1.44
NPM3O75607 AL390726.5-202ENST00000564800 256 ntBASIC6.05□□□□□ -1.44
NPM3O75607 SCARNA17.4-201ENST00000614296 143 ntBASIC6.05□□□□□ -1.44
NPM3O75607 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
NPM3O75607 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC6.05□□□□□ -1.44
NPM3O75607 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
NPM3O75607 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPM3O75607 SDAD1P1-202ENST00000524156 2051 ntBASIC6.05□□□□□ -1.44
NPM3O75607 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.05□□□□□ -1.44
NPM3O75607 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
NPM3O75607 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.04□□□□□ -1.44
NPM3O75607 SNORA22.1-201ENST00000362701 134 ntBASIC6.04□□□□□ -1.44
NPM3O75607 SNORA56-201ENST00000383966 129 ntBASIC6.04□□□□□ -1.44
NPM3O75607 RNU6-524P-201ENST00000384270 107 ntBASIC6.04□□□□□ -1.44
NPM3O75607 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NPM3O75607 AC009414.1-201ENST00000427200 443 ntBASIC6.04□□□□□ -1.44
NPM3O75607 BX323845.1-201ENST00000432417 179 ntBASIC6.04□□□□□ -1.44
NPM3O75607 AC026726.1-201ENST00000512859 601 ntBASIC6.04□□□□□ -1.44
NPM3O75607 RNU6-1258P-201ENST00000516911 111 ntBASIC6.04□□□□□ -1.44
NPM3O75607 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC6.04□□□□□ -1.44
NPM3O75607 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.04□□□□□ -1.44
NPM3O75607 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.04□□□□□ -1.44
NPM3O75607 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.04□□□□□ -1.44
NPM3O75607 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NPM3O75607 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPM3O75607 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.04□□□□□ -1.44
NPM3O75607 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.03□□□□□ -1.44
NPM3O75607 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 MFSD8-216ENST00000641147 4009 ntBASIC6.03□□□□□ -1.44
NPM3O75607 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NPM3O75607 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 Y_RNA.140-201ENST00000363474 103 ntBASIC6.03□□□□□ -1.44
NPM3O75607 SNORA25.6-201ENST00000364121 118 ntBASIC6.03□□□□□ -1.44
NPM3O75607 Y_RNA.470-201ENST00000384307 117 ntBASIC6.03□□□□□ -1.44
NPM3O75607 CYCSP19-201ENST00000411715 316 ntBASIC6.03□□□□□ -1.44
NPM3O75607 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC6.03□□□□□ -1.44
NPM3O75607 AL445685.2-201ENST00000422551 342 ntBASIC6.03□□□□□ -1.44
NPM3O75607 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.03□□□□□ -1.44
NPM3O75607 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC6.03□□□□□ -1.44
NPM3O75607 AP005019.3-201ENST00000620418 560 ntBASIC6.03□□□□□ -1.44
NPM3O75607 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
NPM3O75607 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPM3O75607 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
NPM3O75607 AL355596.1-201ENST00000565399 3996 ntBASIC6.02□□□□□ -1.45
NPM3O75607 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.02□□□□□ -1.45
NPM3O75607 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPM3O75607 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPM3O75607 RNU6-1163P-201ENST00000364516 107 ntBASIC6.02□□□□□ -1.45
NPM3O75607 RPS29P9-201ENST00000440360 171 ntBASIC6.02□□□□□ -1.45
NPM3O75607 PHBP16-201ENST00000446318 950 ntBASIC6.02□□□□□ -1.45
NPM3O75607 RN7SL441P-201ENST00000492388 296 ntBASIC6.02□□□□□ -1.45
NPM3O75607 AL163195.1-201ENST00000496941 348 ntBASIC6.02□□□□□ -1.45
NPM3O75607 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC6.02□□□□□ -1.45
NPM3O75607 AL391358.1-201ENST00000605342 190 ntBASIC6.02□□□□□ -1.45
NPM3O75607 uc_338.25-201ENST00000613756 156 ntBASIC6.02□□□□□ -1.45
NPM3O75607 MIR6780A-201ENST00000615089 68 ntBASIC6.02□□□□□ -1.45
NPM3O75607 MIR7157-201ENST00000635801 60 ntBASIC6.02□□□□□ -1.45
NPM3O75607 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC6.02□□□□□ -1.45
NPM3O75607 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPM3O75607 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
NPM3O75607 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
NPM3O75607 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.02□□□□□ -1.45
NPM3O75607 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPM3O75607 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
NPM3O75607 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
NPM3O75607 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.01□□□□□ -1.45
NPM3O75607 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPM3O75607 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NPM3O75607 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NPM3O75607 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NPM3O75607 RN7SKP145-201ENST00000363291 303 ntBASIC6.01□□□□□ -1.45
NPM3O75607 SNORA2.3-201ENST00000383920 135 ntBASIC6.01□□□□□ -1.45
NPM3O75607 MIR1267-201ENST00000408723 78 ntBASIC6.01□□□□□ -1.45
NPM3O75607 MICF-203ENST00000432679 129 ntBASIC6.01□□□□□ -1.45
NPM3O75607 RN7SL319P-201ENST00000480656 221 ntBASIC6.01□□□□□ -1.45
NPM3O75607 RN7SL636P-201ENST00000497504 294 ntBASIC6.01□□□□□ -1.45
NPM3O75607 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.01□□□□□ -1.45
NPM3O75607 AL356218.2-201ENST00000605264 187 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 872.2 ms