Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MTND1P19-201ENST00000511780 315 ntBASIC2.95□□□□□ -1.94
PROM1O43490 RNU6-1023P-201ENST00000516137 106 ntBASIC2.95□□□□□ -1.94
PROM1O43490 DEFB108E-201ENST00000524692 240 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC027288.2-201ENST00000553028 243 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC025281.1-201ENST00000567026 265 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC105137.2-201ENST00000569073 466 ntBASIC2.95□□□□□ -1.94
PROM1O43490 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC011373.1-201ENST00000607270 237 ntBASIC2.95□□□□□ -1.94
PROM1O43490 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.95□□□□□ -1.94
PROM1O43490 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.95□□□□□ -1.94
PROM1O43490 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PROM1O43490 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
PROM1O43490 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.94□□□□□ -1.94
PROM1O43490 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 AL391987.6-201ENST00000305671 199 ntBASIC2.94□□□□□ -1.94
PROM1O43490 snoU2_19.2-201ENST00000363024 80 ntBASIC2.94□□□□□ -1.94
PROM1O43490 Y_RNA.237-201ENST00000364439 102 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RNU6-487P-201ENST00000365430 104 ntBASIC2.94□□□□□ -1.94
PROM1O43490 U8.10-201ENST00000384260 133 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RNU6-318P-201ENST00000384283 103 ntBASIC2.94□□□□□ -1.94
PROM1O43490 Y_RNA.515-201ENST00000384535 112 ntBASIC2.94□□□□□ -1.94
PROM1O43490 Y_RNA.562-201ENST00000384695 113 ntBASIC2.94□□□□□ -1.94
PROM1O43490 SNORA46-201ENST00000384762 135 ntBASIC2.94□□□□□ -1.94
PROM1O43490 MIR147B-201ENST00000390185 80 ntBASIC2.94□□□□□ -1.94
PROM1O43490 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
PROM1O43490 SNORD12B-201ENST00000410433 91 ntBASIC2.94□□□□□ -1.94
PROM1O43490 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
PROM1O43490 AL441985.1-201ENST00000457727 251 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RN7SL429P-201ENST00000479090 223 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RN7SL489P-201ENST00000486185 223 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RN7SL327P-201ENST00000488659 223 ntBASIC2.94□□□□□ -1.94
PROM1O43490 HMGB3P17-201ENST00000504195 649 ntBASIC2.94□□□□□ -1.94
PROM1O43490 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
PROM1O43490 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.94□□□□□ -1.94
PROM1O43490 AC091152.3-201ENST00000604227 325 ntBASIC2.94□□□□□ -1.94
PROM1O43490 AP001282.2-201ENST00000616149 309 ntBASIC2.94□□□□□ -1.94
PROM1O43490 RN7SL853P-201ENST00000617250 223 ntBASIC2.94□□□□□ -1.94
PROM1O43490 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.94□□□□□ -1.94
PROM1O43490 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.94□□□□□ -1.94
PROM1O43490 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PROM1O43490 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
PROM1O43490 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PROM1O43490 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.93□□□□□ -1.94
PROM1O43490 AL035425.3-201ENST00000564206 4996 ntBASIC2.93□□□□□ -1.94
PROM1O43490 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PROM1O43490 SNORD113-8-201ENST00000363497 74 ntBASIC2.93□□□□□ -1.94
PROM1O43490 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
PROM1O43490 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
PROM1O43490 MIR10B-201ENST00000385011 110 ntBASIC2.93□□□□□ -1.94
PROM1O43490 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
PROM1O43490 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
PROM1O43490 MIR548H3-201ENST00000408771 118 ntBASIC2.93□□□□□ -1.94
PROM1O43490 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
PROM1O43490 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
PROM1O43490 AC096638.1-201ENST00000444678 216 ntBASIC2.93□□□□□ -1.94
PROM1O43490 SNORA31.16-201ENST00000516773 139 ntBASIC2.93□□□□□ -1.94
PROM1O43490 RNU6-1198P-201ENST00000516904 67 ntBASIC2.93□□□□□ -1.94
PROM1O43490 RNU6-58P-201ENST00000517143 103 ntBASIC2.93□□□□□ -1.94
PROM1O43490 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.93□□□□□ -1.94
PROM1O43490 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.93□□□□□ -1.94
PROM1O43490 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
PROM1O43490 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.93□□□□□ -1.94
PROM1O43490 AL450472.1-202ENST00000637286 180 ntBASIC2.93□□□□□ -1.94
PROM1O43490 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.93□□□□□ -1.94
PROM1O43490 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PROM1O43490 AC002543.1-201ENST00000299783 1954 ntBASIC2.92□□□□□ -1.94
PROM1O43490 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
PROM1O43490 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 Y_RNA.54-201ENST00000362766 105 ntBASIC2.92□□□□□ -1.94
PROM1O43490 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.92□□□□□ -1.94
PROM1O43490 RNU6-748P-201ENST00000384648 107 ntBASIC2.92□□□□□ -1.94
PROM1O43490 RNU6-159P-201ENST00000391080 106 ntBASIC2.92□□□□□ -1.94
PROM1O43490 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
PROM1O43490 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
PROM1O43490 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 AC012306.1-201ENST00000423267 114 ntBASIC2.92□□□□□ -1.94
PROM1O43490 AC090525.1-201ENST00000479116 478 ntBASIC2.92□□□□□ -1.94
PROM1O43490 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.92□□□□□ -1.94
PROM1O43490 SNORD19.2-201ENST00000516978 73 ntBASIC2.92□□□□□ -1.94
PROM1O43490 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
PROM1O43490 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
PROM1O43490 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.92□□□□□ -1.94
PROM1O43490 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 AC141273.2-201ENST00000618989 130 ntBASIC2.92□□□□□ -1.94
PROM1O43490 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PROM1O43490 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.92□□□□□ -1.94
PROM1O43490 AC010889.1-201ENST00000566193 2666 ntBASIC2.92□□□□□ -1.94
PROM1O43490 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PROM1O43490 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.91□□□□□ -1.94
PROM1O43490 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.91□□□□□ -1.94
PROM1O43490 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PROM1O43490 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
PROM1O43490 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms