Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.55□□□□□ -1.68
PHOX2BQ99453 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.55□□□□□ -1.68
PHOX2BQ99453 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHOX2BQ99453 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHOX2BQ99453 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHOX2BQ99453 SNORD31B-201ENST00000364977 69 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 SNORD58C-201ENST00000365223 64 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 MIR34B-201ENST00000385076 84 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 HMGN2P8-201ENST00000391458 268 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 RNA5SP146-201ENST00000410743 123 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 RNA5SP38-201ENST00000410750 119 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 MLLT10P1-201ENST00000418346 262 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 CYCSP49-201ENST00000420810 319 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 Y_RNA.690-201ENST00000516603 95 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 AC024614.2-201ENST00000577584 372 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 AC103810.1-201ENST00000579873 453 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 AC091178.2-201ENST00000584401 117 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 AC004832.5-201ENST00000608677 401 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 SCARNA15.3-201ENST00000626315 122 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 SCARNA4.1-201ENST00000628597 123 ntBASIC4.54□□□□□ -1.68
PHOX2BQ99453 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHOX2BQ99453 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.54□□□□□ -1.68
PHOX2BQ99453 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHOX2BQ99453 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHOX2BQ99453 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHOX2BQ99453 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 RNU6-880P-201ENST00000384526 107 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 Y_RNA.617-201ENST00000410920 90 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 AC126124.2-201ENST00000413542 321 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 SNORD77.4-201ENST00000516158 81 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 MIR4513-201ENST00000581077 86 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 AC105245.1-201ENST00000581934 244 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 RMST_8.1-201ENST00000610287 165 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 AC090517.3-201ENST00000625170 141 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 AC009093.8-201ENST00000641769 292 ntBASIC4.53□□□□□ -1.68
PHOX2BQ99453 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PHOX2BQ99453 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHOX2BQ99453 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHOX2BQ99453 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHOX2BQ99453 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PHOX2BQ99453 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHOX2BQ99453 DYNLT3P1-201ENST00000378574 347 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 RNU6-57P-201ENST00000411348 103 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC063976.3-201ENST00000426849 329 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC006445.1-201ENST00000491925 405 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 RN7SL441P-201ENST00000492388 296 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 RNU2-34P-201ENST00000516534 121 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC109329.2-201ENST00000519658 482 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 MIR5685-201ENST00000579080 79 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 Z82209.1-201ENST00000422141 2135 ntBASIC4.52□□□□□ -1.69
PHOX2BQ99453 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PHOX2BQ99453 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PHOX2BQ99453 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 Y_RNA.634-201ENST00000364811 113 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 RNU6-234P-201ENST00000365229 104 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 SNORD14D-201ENST00000384390 87 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 AC006028.1-201ENST00000438379 402 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 RPS26P45-201ENST00000471748 340 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 AL049873.1-201ENST00000480540 376 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 RN7SL558P-201ENST00000497468 299 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 MIR4765-201ENST00000585007 77 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 MIR6852-201ENST00000621699 66 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHOX2BQ99453 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PHOX2BQ99453 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PHOX2BQ99453 AC015813.6-201ENST00000624409 5808 ntBASIC4.51□□□□□ -1.69
PHOX2BQ99453 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHOX2BQ99453 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
PHOX2BQ99453 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.5□□□□□ -1.69
PHOX2BQ99453 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHOX2BQ99453 Y_RNA.203-201ENST00000364106 102 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 RNU6-1235P-201ENST00000384559 107 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms