Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ARL5AP4-201ENST00000430731 512 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.28□□□□□ -1.88
CNGA1P29973 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.28□□□□□ -1.88
CNGA1P29973 Y_RNA.661-201ENST00000516003 99 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 RNU6-586P-201ENST00000517265 104 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 EIF4A1P12-201ENST00000551910 141 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 AC027288.2-201ENST00000553028 243 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.28□□□□□ -1.88
CNGA1P29973 AC087588.2-201ENST00000617667 426 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 MIR5739-201ENST00000619803 80 ntBASIC3.28□□□□□ -1.88
CNGA1P29973 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CNGA1P29973 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CNGA1P29973 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.28□□□□□ -1.88
CNGA1P29973 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.28□□□□□ -1.89
CNGA1P29973 RNU6-137P-201ENST00000363680 108 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 U3.9-201ENST00000363823 204 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 Y_RNA.319-201ENST00000365138 92 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CNGA1P29973 RNU6-308P-201ENST00000390957 107 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 AC003685.2-201ENST00000422795 395 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 AL590556.1-201ENST00000423231 483 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.27□□□□□ -1.89
CNGA1P29973 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.27□□□□□ -1.89
CNGA1P29973 AC007215.1-201ENST00000464893 276 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 AC090096.1-201ENST00000489168 390 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.27□□□□□ -1.89
CNGA1P29973 RN7SKP40-201ENST00000517211 242 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
CNGA1P29973 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.27□□□□□ -1.89
CNGA1P29973 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CNGA1P29973 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.27□□□□□ -1.89
CNGA1P29973 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNGA1P29973 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNGA1P29973 Y_RNA.106-201ENST00000363189 100 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 Y_RNA.132-201ENST00000363421 102 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 Y_RNA.314-201ENST00000365114 102 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 Y_RNA.364-201ENST00000365532 101 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 RNY1P14-201ENST00000384426 108 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 RNU6-1093P-201ENST00000391194 107 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 MCFD2P1-201ENST00000417812 300 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.26□□□□□ -1.89
CNGA1P29973 GSTA11P-201ENST00000452866 669 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 RN7SL499P-201ENST00000481141 276 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 RN7SKP295-201ENST00000517264 153 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.26□□□□□ -1.89
CNGA1P29973 AC023043.3-201ENST00000593113 385 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 AC008121.3-201ENST00000618726 433 ntBASIC3.26□□□□□ -1.89
CNGA1P29973 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
CNGA1P29973 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CNGA1P29973 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.25□□□□□ -1.89
CNGA1P29973 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
CNGA1P29973 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.25□□□□□ -1.89
CNGA1P29973 Y_RNA.28-201ENST00000362554 111 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 RNU4-42P-201ENST00000364738 142 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 AL161788.1-201ENST00000441805 169 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.25□□□□□ -1.89
CNGA1P29973 UQCRHP3-201ENST00000451503 251 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 CYP2C59P-201ENST00000457790 269 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 AL163540.1-201ENST00000485382 386 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 RN7SL633P-201ENST00000488974 297 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 ANXA2P1-201ENST00000505539 926 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.25□□□□□ -1.89
CNGA1P29973 AC008413.1-201ENST00000511864 177 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 RNU6-1198P-201ENST00000516904 67 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 AC018630.3-201ENST00000542637 96 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.25□□□□□ -1.89
CNGA1P29973 AL138963.2-201ENST00000605137 226 ntBASIC3.25□□□□□ -1.89
CNGA1P29973 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.25□□□□□ -1.89
CNGA1P29973 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CNGA1P29973 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.24□□□□□ -1.89
CNGA1P29973 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CNGA1P29973 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNGA1P29973 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNGA1P29973 RNU6-944P-201ENST00000364023 107 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 RNA5SP240-201ENST00000365355 128 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNGA1P29973 SNORA12-201ENST00000391162 147 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 RNU1-139P-201ENST00000391307 165 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 Y_RNA.597-201ENST00000410463 100 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.24□□□□□ -1.89
CNGA1P29973 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.24□□□□□ -1.89
CNGA1P29973 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 MTND4P19-201ENST00000446659 478 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AP000870.1-201ENST00000472927 406 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 YWHAEP4-201ENST00000505390 198 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 RNA5SP54-201ENST00000516951 92 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AC144568.1-201ENST00000520139 137 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AL442663.2-201ENST00000554385 511 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AL356575.1-201ENST00000603008 283 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AC092447.9-201ENST00000603395 144 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AC016727.2-201ENST00000603988 621 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AC007485.1-201ENST00000616755 206 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 AC138305.3-201ENST00000624988 240 ntBASIC3.24□□□□□ -1.89
CNGA1P29973 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CNGA1P29973 AC096644.4-201ENST00000563417 2912 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms