Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AC007656.2-201ENST00000624902 4547 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 DNM1P47-203ENST00000571780 12667 ntBASIC5.75□□□□□ -1.49
RNF39Q9H2S5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF39Q9H2S5 OR14L1P-202ENST00000641545 3009 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 RNA5SP305-201ENST00000362665 119 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 SNORA25.5-201ENST00000363782 126 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 REREP1Y-201ENST00000422655 198 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 AC091390.1-201ENST00000433904 331 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 AC073850.1-201ENST00000449243 255 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 AL592156.1-201ENST00000508758 304 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 RNU7-79P-201ENST00000516082 62 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 RNA5SP116-201ENST00000516132 98 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 RNU6-856P-201ENST00000516959 98 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 AL357312.1-201ENST00000603879 298 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 RNA5SP108-201ENST00000605921 117 ntBASIC5.74□□□□□ -1.49
RNF39Q9H2S5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RNF39Q9H2S5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 RN7SKP145-201ENST00000363291 303 ntBASIC5.73□□□□□ -1.49
RNF39Q9H2S5 RNA5SP514-201ENST00000363717 111 ntBASIC5.73□□□□□ -1.49
RNF39Q9H2S5 RNA5SP192-201ENST00000364404 120 ntBASIC5.73□□□□□ -1.49
RNF39Q9H2S5 RN7SKP125-201ENST00000410481 302 ntBASIC5.73□□□□□ -1.49
RNF39Q9H2S5 AC093162.1-201ENST00000419682 124 ntBASIC5.73□□□□□ -1.49
RNF39Q9H2S5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF39Q9H2S5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 AC000123.3-201ENST00000624029 4975 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 snoU2-30.2-201ENST00000362805 70 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 SNORA70.2-201ENST00000364506 135 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 MIR600-201ENST00000385007 98 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 RNA5SP467-201ENST00000391274 118 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 RNU7-94P-201ENST00000459576 63 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 AC083982.1-201ENST00000485679 344 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 RN7SL97P-201ENST00000486780 299 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 AL020996.3-201ENST00000606617 222 ntBASIC5.72□□□□□ -1.49
RNF39Q9H2S5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF39Q9H2S5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RNF39Q9H2S5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RNF39Q9H2S5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF39Q9H2S5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF39Q9H2S5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 HMGN2P18-201ENST00000450680 270 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 AP002884.2-201ENST00000471647 395 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 RNU1-142P-201ENST00000516682 145 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 MIR4436B2-201ENST00000581415 91 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 MIR4436B1-201ENST00000583272 91 ntBASIC5.71□□□□□ -1.5
RNF39Q9H2S5 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF39Q9H2S5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 Y_RNA.42-201ENST00000362660 108 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 SNORA1.2-201ENST00000365189 134 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AL645733.1-201ENST00000402250 217 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 BX510359.1-201ENST00000456973 237 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 MIR4646-201ENST00000580775 63 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 SNORD92-201ENST00000585078 85 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AC011447.4-201ENST00000587562 111 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AL356280.1-201ENST00000603614 379 ntBASIC5.7□□□□□ -1.5
RNF39Q9H2S5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms