Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MALAT1.1-201ENST00000618249 95 ntBASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL25A1Q9BXS0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MIR590-201ENST00000385008 97 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 RNA5SP496-201ENST00000391240 109 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 RNA5SP241-201ENST00000391326 114 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MIR208B-201ENST00000401172 77 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MIR1290-201ENST00000408735 78 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 RNA5SP504-201ENST00000410676 117 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 RNA5SP247-201ENST00000411181 105 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 AC005300.1-201ENST00000428401 373 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MTATP8P2-201ENST00000435212 202 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 SNORD116-26-201ENST00000516006 96 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MED28P6-201ENST00000558776 231 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 SNORD11B-201ENST00000607707 90 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 AL138880.2-201ENST00000616214 239 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 AC068205.3-201ENST00000636385 468 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 U2.21-201ENST00000637295 81 ntBASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL25A1Q9BXS0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 Y_RNA.49-201ENST00000362714 112 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 Y_RNA.52-201ENST00000362760 96 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AP002088.1-201ENST00000382740 395 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 MIR1255A-201ENST00000408338 113 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AC004866.1-201ENST00000411748 78 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 CALM2P4-201ENST00000430810 426 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AC125238.1-201ENST00000448842 249 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 RNU6-1299P-201ENST00000516316 100 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 RNU6-344P-201ENST00000516635 111 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 RN7SL290P-201ENST00000578661 300 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AL137849.1-201ENST00000604767 169 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AL021707.8-201ENST00000609428 183 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 Y_RNA.818-201ENST00000618813 71 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AL035470.1-201ENST00000622571 220 ntBASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.17□□□□□ -1.74
COL25A1Q9BXS0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AL513302.2-201ENST00000562313 1842 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 MIR891A-201ENST00000401237 79 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AL591419.1-201ENST00000427423 339 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AC010531.2-201ENST00000465012 153 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 MRPS36P2-201ENST00000512569 299 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 RNU1-104P-201ENST00000517280 175 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AC026421.1-201ENST00000519101 163 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AP003357.1-201ENST00000604497 148 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 RNU1-30P-201ENST00000606575 163 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AL590808.1-201ENST00000618696 141 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 MIR3202-2-201ENST00000635980 79 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 MIR2052-201ENST00000636055 55 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL25A1Q9BXS0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL25A1Q9BXS0 RNU6-778P-201ENST00000363269 103 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 SNORA5B-201ENST00000363786 132 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 Y_RNA.244-201ENST00000364484 109 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 MIR153-1-201ENST00000384914 90 ntBASIC4.15□□□□□ -1.75
COL25A1Q9BXS0 RNA5SP136-201ENST00000410906 107 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms