Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRCH3Q96II8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 MAPK10-349ENST00000641767 3661 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRCH3Q96II8 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
LRCH3Q96II8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRCH3Q96II8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 Y_RNA.78-201ENST00000362970 110 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 Y_RNA.244-201ENST00000364484 109 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 RNVU1-14-201ENST00000384770 164 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 AC007064.1-201ENST00000412238 351 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.72□□□□□ -1.65
LRCH3Q96II8 HMGN2P31-201ENST00000432430 273 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 AC108751.2-201ENST00000469993 231 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 RNA5SP519-201ENST00000516480 119 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 RNU6-113P-201ENST00000516653 101 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 RNU6-63P-201ENST00000516690 95 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 AC141557.1-201ENST00000540982 400 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 RPL23AP91-201ENST00000569211 455 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 MIR6500-201ENST00000622700 86 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.72□□□□□ -1.65
LRCH3Q96II8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LRCH3Q96II8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRCH3Q96II8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
LRCH3Q96II8 MFSD8-242ENST00000641690 4199 ntBASIC4.72□□□□□ -1.65
LRCH3Q96II8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LRCH3Q96II8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.71□□□□□ -1.65
LRCH3Q96II8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 RNU1-83P-201ENST00000363426 164 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 AL133475.1-201ENST00000404414 305 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.71□□□□□ -1.66
LRCH3Q96II8 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 RNU6-904P-201ENST00000516206 101 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 AC068339.1-201ENST00000526965 141 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.71□□□□□ -1.66
LRCH3Q96II8 AL929325.1-201ENST00000603096 117 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 U6.105-201ENST00000637379 88 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.71□□□□□ -1.66
LRCH3Q96II8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.71□□□□□ -1.66
LRCH3Q96II8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 AC004944.1-201ENST00000517807 3059 ntBASIC4.71□□□□□ -1.66
LRCH3Q96II8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRCH3Q96II8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.7□□□□□ -1.66
LRCH3Q96II8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRCH3Q96II8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 DHX9P1-201ENST00000436565 3076 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 RNU6-271P-201ENST00000363858 105 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 MIR586-201ENST00000385035 97 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 SNORA48.2-201ENST00000390926 124 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 UBE2DNL-203ENST00000474922 222 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 IGKV3-31-201ENST00000523109 329 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 MIR3129-201ENST00000581095 76 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 FAM71BP1-201ENST00000604431 523 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
LRCH3Q96II8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.7□□□□□ -1.66
LRCH3Q96II8 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
LRCH3Q96II8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRCH3Q96II8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRCH3Q96II8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
LRCH3Q96II8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRCH3Q96II8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRCH3Q96II8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRCH3Q96II8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.69□□□□□ -1.66
LRCH3Q96II8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRCH3Q96II8 Y_RNA.17-201ENST00000362433 111 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 Y_RNA.66-201ENST00000362862 102 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 AL139095.1-201ENST00000404326 391 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 AL353705.1-201ENST00000433468 480 ntBASIC4.69□□□□□ -1.66
LRCH3Q96II8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms